RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TULP2O00295 520 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 SLC9A3R1O14745 358 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-213ENST00000498495 MED7O43513 233 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-213ENST00000498495 TBX18O95935 607 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 SETSIPP0DME0 302 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 ARSAP15289 507 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 PTMSP20962 102 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
HSPG2-213ENST00000498495 CTHP32929 405 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 ZNF132P52740 706 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 PTPN5P54829 565 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 APBA1Q02410 837 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 TYRO3Q06418 890 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 KCNMA1Q12791 1236 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 TADA2BQ86TJ2 420 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 ARHGAP18Q8N392 663 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 CPA6Q8N4T0 437 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 KIAA1958Q8N8K9 716 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 ANKRD20A12PQ8NF67 263 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 KCTD13Q8WZ19 329 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 ATP2A3Q93084 1043 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 VPS16Q9H269 839 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 LMAN1LQ9HAT1 526 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 NMUR1Q9HB89 426 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 CYLDQ9NQC7 956 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 OSER1Q9NX31 292 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 TAB2Q9NYJ8 693 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 DLGAP2Q9P1A6 1054 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 CFAP97Q9P2B7 532 aa13.47□□□□□ -0.25
HSPG2-213ENST00000498495 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.47□□□□□ -0.25
HSPG2-213ENST00000498495 OTOL1A6NHN0 477 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-213ENST00000498495 H0Y858 1186 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 M0QYV0 167 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 NFATC1O95644 943 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 ZBED1O96006 694 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 CALCAP01258 141 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 LCP1P13796 627 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 MAGEA9P43362 315 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 PLA2G4AP47712 749 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 MYL5Q02045 173 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 TCF15Q12870 199 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 EML3Q32P44 896 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 PKDCCQ504Y2 493 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 CDKAL1Q5VV42 579 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 PM20D1Q6GTS8 502 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 SCD5Q86SK9 330 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 ADGRG2Q8IZP9 1017 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 SIX6OS1Q8N1H7 587 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 SLC35F5Q8WV83 523 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 ZNF606Q8WXB4 792 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 SECISBP2LQ93073 1101 aaKnown RBP13.46□□□□□ -0.25
HSPG2-213ENST00000498495 EXOC4Q96A65 974 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 CLDN23Q96B33 292 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 CDK5RAP1Q96SZ6 601 aaKnown RBP13.46□□□□□ -0.25
HSPG2-213ENST00000498495 ULBP1Q9BZM6 244 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.46□□□□□ -0.25
HSPG2-213ENST00000498495 CLIC5Q9NZA1 410 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 TBC1D14Q9P2M4 693 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 DNMT3LQ9UJW3 386 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 NUDT5Q9UKK9 219 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 TICRRQ7Z2Z1 1910 aa13.46□□□□□ -0.25
HSPG2-213ENST00000498495 TRIOO75962 3097 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 COL4A3Q01955 1670 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 E2F8A0AVK6 867 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 THAP12O43422 761 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 CHRNB1P11230 501 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 GNA15P30679 374 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 GJA4P35212 333 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
HSPG2-213ENST00000498495 RGS7P49802 495 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 YWHAGP61981 247 aaKnown RBP eCLIP13.45□□□□□ -0.26
HSPG2-213ENST00000498495 PTK2Q05397 1052 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 GOLGA8FQ08AF8 430 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 ADIGQ0VDE8 80 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 FZD5Q13467 585 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 PON2Q15165 354 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 KRT31Q15323 416 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 KLHL40Q2TBA0 621 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 ANO6Q4KMQ2 910 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 C10orf120Q5SQS8 335 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 FKBP15Q5T1M5 1219 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 BTBD8Q5XKL5 378 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 SMYD5Q6GMV2 418 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 PMF1Q6P1K2 205 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 KLHDC10Q6PID8 442 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 TXNDC11Q6PKC3 985 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 C1orf210Q8IVY1 113 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 ATOH1Q92858 354 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-213ENST00000498495 FAM122AQ96E09 287 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 HSFY1Q96LI6 401 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 KLF16Q9BXK1 252 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-213ENST00000498495 SIX2Q9NPC8 291 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 CNGB3Q9NQW8 809 aa13.45□□□□□ -0.26
HSPG2-213ENST00000498495 SPATA6Q9NWH7 488 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms