RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ELMO3Q96BJ8 720 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 CCDC127Q96BQ5 260 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 USP28Q96RU2 1077 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 CGRRF1Q99675 332 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 CAPN10Q9HC96 672 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 A0A1W2PQF6 199 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 A8MXQ7 604 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 CLIC2O15247 247 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 HOXC11O43248 304 aaPredicted RBP17.05■□□□□ 0.32
MUC1-220ENST00000498431 AP5Z1O43299 807 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 IRF1P10914 325 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 CYP2J2P51589 502 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 CDH8P55286 799 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 MYL6P60660 151 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 RING1Q06587 406 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 CYP24A1Q07973 514 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 BYSLQ13895 437 aaKnown RBP17.05■□□□□ 0.32
MUC1-220ENST00000498431 PSMD6Q15008 389 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 ANO4Q32M45 955 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 C10orf76Q5T2E6 689 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 PAQR9Q6ZVX9 377 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
MUC1-220ENST00000498431 SLC41A1Q8IVJ1 513 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 TERB1Q8NA31 727 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 OTUB2Q96DC9 234 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 ACOX2Q99424 681 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 XYLT2Q9H1B5 865 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 SMYD3Q9H7B4 428 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
MUC1-220ENST00000498431 KIAA1586Q9HCI6 787 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 CD248Q9HCU0 757 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 CD93Q9NPY3 652 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 SPHK2Q9NRA0 654 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 AGPAT3Q9NRZ7 376 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 GMIPQ9P107 970 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 DEC1Q9P2X7 70 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 NXF1Q9UBU9 619 aaKnown RBP17.05■□□□□ 0.32
MUC1-220ENST00000498431 SLC6A14Q9UN76 642 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 MSRB2Q9Y3D2 182 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 SH3BP1Q9Y3L3 701 aa17.05■□□□□ 0.32
MUC1-220ENST00000498431 CELSR3Q9NYQ7 3312 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 IGHV1OR15-9A0A0B4J2B8 117 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 RTN3O95197 1032 aaPredicted RBP17.04■□□□□ 0.32
MUC1-220ENST00000498431 SERPINF2P08697 491 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 HOXB2P14652 356 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 HOXD12P35452 270 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 SLC5A3P53794 718 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 ATXN3P54252 364 aaPredicted RBP17.04■□□□□ 0.32
MUC1-220ENST00000498431 GFPT1Q06210 699 aaPredicted RBP17.04■□□□□ 0.32
MUC1-220ENST00000498431 ZNF33AQ06730 810 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 CUL4AQ13619 759 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 SLC39A14Q15043 492 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 BTBD8Q5XKL5 378 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 EGFLAMQ63HQ2 1017 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 STXBP4Q6ZWJ1 553 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 FAM35AQ86V20 835 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 CHCHD4Q8N4Q1 142 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 MINDY1Q8N5J2 469 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 PDZD8Q8NEN9 1154 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 OVCA2Q8WZ82 227 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 TRIM9Q9C026 710 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 IL37Q9NZH6 218 aa17.04■□□□□ 0.32
MUC1-220ENST00000498431 FASNP49327 2511 aaKnown RBP17.04■□□□□ 0.32
MUC1-220ENST00000498431 TAF4O00268 1085 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 EIF3DO15371 548 aaKnown RBP eCLIP17.03■□□□□ 0.32
MUC1-220ENST00000498431 ZDHHC11BP0C7U3 371 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 CD59P13987 128 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 NDUFV2P19404 249 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 SYT1P21579 422 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 NTSR1P30989 418 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 DPP6P42658 865 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 CASP4P49662 377 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 E2F4Q16254 413 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 SNX30Q5VWJ9 437 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 NELFCDQ8IXH7 590 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 HDDC3Q8N4P3 179 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 CEP76Q8TAP6 659 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 ZNF507Q8TCN5 953 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 CAMK1GQ96NX5 476 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 SLC6A17Q9H1V8 727 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 KBTBD4Q9NVX7 518 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 CYP8B1Q9UNU6 501 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 LHX6Q9UPM6 363 aa17.03■□□□□ 0.32
MUC1-220ENST00000498431 ARHGAP33O14559 1287 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 GREM1O60565 184 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 OPHN1O60890 802 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 STAU1O95793 577 aaKnown RBP17.02■□□□□ 0.32
MUC1-220ENST00000498431 ASIC1P78348 528 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 TRPC3Q13507 836 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 LRSAM1Q6UWE0 723 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 SLC36A4Q6YBV0 504 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 TRMT11Q7Z4G4 463 aaKnown RBP17.02■□□□□ 0.32
MUC1-220ENST00000498431 ZMIZ2Q8NF64 920 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 PLEKHO2Q8TD55 490 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 KCNV2Q8TDN2 545 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms