RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 DNAJB4Q9UDY4 337 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 ASIC3Q9UHC3 531 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 HPCAL4Q9UM19 191 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 ATP11BQ9Y2G3 1177 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 R3HDM2Q9Y2K5 976 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 MAP2K7O14733 419 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TRAPPC3O43617 180 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 BEST1O76090 585 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 CXCL10P02778 98 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 HSPA8P11142 646 aaKnown RBP8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 KRT10P13645 584 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ECHS1P30084 290 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 CYP2C18P33260 490 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 PTGIRP43119 386 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TKTL1P51854 596 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 CDR1P51861 262 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 CDH6P55285 790 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 DYNLT1P63172 113 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM189BP81408 668 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TLE2Q04725 743 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ADCY1Q08828 1119 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 PTK6Q13882 451 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 GPNMBQ14956 572 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TAF5Q15542 800 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TCTN1Q2MV58 587 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 CCDC14Q49A88 953 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 KCNT1Q5JUK3 1230 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ZNF280DQ6N043 979 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SCYL2Q6P3W7 929 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 CNKSR3Q6P9H4 555 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 C4orf50Q6ZRC1 276 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 PAQR9Q6ZVX9 377 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SYDE1Q6ZW31 735 aaPredicted RBP8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ARCQ7LC44 396 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 GPRIN1Q7Z2K8 1008 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ANKS1BQ7Z6G8 1248 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 DEFB128Q7Z7B8 93 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 DDX42Q86XP3 938 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SPATA2LQ8IUW3 424 aaPredicted RBP8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SCUBE3Q8IX30 993 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ARFGAP1Q8N6T3 406 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 EIF1ADQ8N9N8 165 aaKnown RBP8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TEKT4Q8WW24 435 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SEC14L1Q92503 715 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 RAPGEF5Q92565 580 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SLCO2A1Q92959 643 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TMEM209Q96SK2 561 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TBCBQ99426 244 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 FMO2Q99518 471 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SMOQ99835 787 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM118BQ9BPY3 351 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ERP44Q9BS26 406 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 CALN1Q9BXU9 219 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ULBP1Q9BZM6 244 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 NEUROG2Q9H2A3 272 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 VIPAS39Q9H9C1 493 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 ADAM28Q9UKQ2 775 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 TBX21Q9UL17 535 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 STAP1Q9ULZ2 295 aa8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 SF3B1O75533 1304 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDZRN3-212ENST00000498048 GRXCR2A6NFK2 248 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 C3orf70A6NLC5 250 aaPredicted RBP8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 TBKBP1A7MCY6 615 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 SYN3O14994 580 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 SNPHO15079 494 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 MDM4O15151 490 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 LIASO43766 372 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 CD48P09326 243 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 CLTBP09497 229 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 ATF2P15336 505 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 BDNFP23560 247 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 KDELR1P24390 212 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 RFC2P35250 354 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 MATKP42679 507 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 KCNJ1P48048 391 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 RABGGTBP53611 331 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 CACNA2D1P54289 1103 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 VCPP55072 806 aaKnown RBP8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 HDAC4P56524 1084 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 DAOAP59103 153 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM193AP78312 1265 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 MRPS5P82675 430 aaKnown RBP8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 FAAP100Q0VG06 881 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 DPYSL3Q14195 570 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 CCNG2Q16589 344 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 RAB6CQ53S08 254 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 ARSIQ5FYB1 569 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 SH3PXD2AQ5TCZ1 1133 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 DUPD1Q68J44 220 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 BBS12Q6ZW61 710 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 CYP4V2Q6ZWL3 525 aaPredicted RBP8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 ZNF365Q70YC5 407 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 STRADAQ7RTN6 431 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 DEFB106AQ8N104 65 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 MREGQ8N565 214 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 TTC13Q8NBP0 860 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 KCTD6Q8NC69 237 aa8.43□□□□□ -1.06
PDZRN3-212ENST00000498048 ZMIZ2Q8NF64 920 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms