RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MYL3P08590 195 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 MYCLP12524 364 aaPredicted RBP3.43□□□□□ -1.86
RIF1-212ENST00000498041 CD19P15391 556 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 FGFR2P21802 821 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 AK2P54819 239 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 SUMO2P61956 95 aaKnown RBP3.43□□□□□ -1.86
RIF1-212ENST00000498041 HOXA4Q00056 320 aaPredicted RBP3.43□□□□□ -1.86
RIF1-212ENST00000498041 E2F1Q01094 437 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 PICALMQ13492 652 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 KCNAB1Q14722 419 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 L1TD1Q5T7N2 865 aaKnown RBP3.43□□□□□ -1.86
RIF1-212ENST00000498041 MANEALQ5VSG8 457 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 RRAGBQ5VZM2 374 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 FCRLBQ6BAA4 426 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 SYCE2Q6PIF2 218 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 NAPRTQ6XQN6 538 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 DPY19L3Q6ZPD9 716 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 ZNF788Q6ZQV5 615 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 CATSPERGQ6ZRH7 1159 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 ZDHHC12Q96GR4 267 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 FAM227BQ96M60 508 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 HIST1H2AAQ96QV6 131 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 THAP7Q9BT49 309 aaPredicted RBP3.43□□□□□ -1.86
RIF1-212ENST00000498041 HEYLQ9NQ87 328 aaPredicted RBP3.43□□□□□ -1.86
RIF1-212ENST00000498041 MYO1AQ9UBC5 1043 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 AMFRQ9UKV5 643 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 HPSEQ9Y251 543 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 BIVM-ERCC5R4GMW8 1640 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 AOX1Q06278 1338 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 PRDM2Q13029 1718 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 TOP2BQ02880 1626 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 AGPSO00116 658 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 EXOC5O00471 708 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 CES2O00748 559 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 PDE8BO95263 885 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 FGAP02671 866 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 MYL4P12829 197 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 FBLP22087 321 aaKnown RBP3.42□□□□□ -1.86
RIF1-212ENST00000498041 TM4SF4P48230 202 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 CYP4F2P78329 520 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 LONRF1Q17RB8 773 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 ZKSCAN2Q63HK3 967 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 DENND2CQ68D51 928 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 IL31Q6EBC2 164 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 USP17L6PQ6QN14 398 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 TRIM72Q6ZMU5 477 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 PTCHD4Q6ZW05 846 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 PTF1AQ7RTS3 328 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 GLCCI1Q86VQ1 547 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 SFTPA1Q8IWL2 248 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 CCDC150Q8NCX0 1101 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 HASPINQ8TF76 798 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 NTN5Q8WTR8 489 aaPredicted RBP3.42□□□□□ -1.86
RIF1-212ENST00000498041 BRI3BPQ8WY22 251 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 REPS1Q96D71 796 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 DAZAP1Q96EP5 407 aaKnown RBP3.42□□□□□ -1.86
RIF1-212ENST00000498041 LRRC46Q96FV0 321 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 EIF2AQ9BY44 585 aaKnown RBP3.42□□□□□ -1.86
RIF1-212ENST00000498041 MAGEB5Q9BZ81 275 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 TFCP2L1Q9NZI6 479 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 NKX1-2Q9UD57 310 aaPredicted RBP3.42□□□□□ -1.86
RIF1-212ENST00000498041 SERGEFQ9UGK8 458 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 STEAP1Q9UHE8 339 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 VPS51Q9UID3 782 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 PHTF1Q9UMS5 762 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 TOPBP1Q92547 1522 aa3.42□□□□□ -1.86
RIF1-212ENST00000498041 CUX2O14529 1486 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 RASA4BC9J798 803 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 H7C1Q1 480 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 RASA4O43374 803 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 KCNQ3O43525 872 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 PLIN1O60240 522 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 EXOC3O60645 756 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 RBMXL2O75526 392 aaKnown RBP3.41□□□□□ -1.86
RIF1-212ENST00000498041 PRKCGP05129 697 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 IDEP14735 1019 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 CREB1P16220 341 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 TNFSF4P23510 183 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 RBL1P28749 1068 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 NTSR1P30989 418 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 ATICP31939 592 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 ALDH5A1P51649 535 aaPredicted RBP3.41□□□□□ -1.86
RIF1-212ENST00000498041 NEK3P51956 506 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 COPAP53621 1224 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 PROK1P58294 105 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 CLCA4Q14CN2 919 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 ARL13BQ3SXY8 428 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 MAP9Q49MG5 647 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 FAM209BQ5JX69 171 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 HIBCHQ6NVY1 386 aaPredicted RBP3.41□□□□□ -1.86
RIF1-212ENST00000498041 CLEC9AQ6UXN8 241 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 USP49Q70CQ1 688 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 C11orf44Q8N8P7 122 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 TERB1Q8NA31 727 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 NGDNQ8NEJ9 315 aaKnown RBP3.41□□□□□ -1.86
RIF1-212ENST00000498041 SEMA6DQ8NFY4 1073 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 CYP2W1Q8TAV3 490 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 PARD3BQ8TEW8 1205 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 CTHRC1Q96CG8 243 aa3.41□□□□□ -1.86
RIF1-212ENST00000498041 TNIP3Q96KP6 325 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms