RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 PTK2Q05397 1052 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 KCNJ12Q14500 433 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 ZNF77Q15935 545 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 HSF5Q4G112 596 aaPredicted RBP8□□□□□ -1.13
CDHR3-214ENST00000496633 TCP11X2Q5H9J9 407 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 RAB41Q5JT25 222 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 STXBP5Q5T5C0 1151 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 BTBD8Q5XKL5 378 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 CWF19L1Q69YN2 538 aaKnown RBP8□□□□□ -1.13
CDHR3-214ENST00000496633 SCARA3Q6AZY7 606 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 PM20D1Q6GTS8 502 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 TRIM65Q6PJ69 517 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 C1orf210Q8IVY1 113 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 ARL14EPQ8N8R7 260 aaPredicted RBP8□□□□□ -1.13
CDHR3-214ENST00000496633 ZNF557Q8N988 423 aaPredicted RBP8□□□□□ -1.13
CDHR3-214ENST00000496633 MSANTD4Q8NCY6 345 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 LMO3Q8TAP4 145 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 SH3RF2Q8TEC5 729 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 WHAMMQ8TF30 809 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 SMOQ99835 787 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 PLA2G2FQ9BZM2 168 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 FAM117AQ9C073 453 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 HEBP1Q9NRV9 189 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 HMGXB4Q9UGU5 601 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 TSPAN16Q9UKR8 245 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 NFE2L3Q9Y4A8 694 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 NME7Q9Y5B8 376 aa8□□□□□ -1.13
CDHR3-214ENST00000496633 MIA3Q5JRA6 1907 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 LEFTY2O00292 366 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 O00370 1275 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 OBSL1O75147 1896 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 TADA3O75528 432 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 PRAMEF12O95522 483 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 ZBED1O96006 694 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 CCDC172P0C7W6 258 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 KRT5P13647 590 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 CDK11BP21127 795 aaKnown RBP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 CHKAP35790 457 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 PLA2G5P39877 138 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 USP46P62068 366 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 IFRD2Q12894 506 aaPredicted RBP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 LRMPQ12912 555 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 FILIP1LQ4L180 1135 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 RSRC2Q7L4I2 434 aaKnown RBP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 BEND5Q7L4P6 421 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 PIGZQ86VD9 579 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 UBR7Q8N806 425 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 TMEM105Q8N8V8 129 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 RBBP8NLQ8NC74 664 aaPredicted RBP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 ZMIZ2Q8NF64 920 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 SCAMP5Q8TAC9 235 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 GPT2Q8TD30 523 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 RNF139Q8WU17 664 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 MED15Q96RN5 788 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 TWNKQ96RR1 684 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 BPIFA3Q9BQP9 254 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 CHRDQ9H2X0 955 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 SMOC2Q9H3U7 446 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 ECT2Q9H8V3 914 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 ABCC13Q9NSE7 274 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 SPATA6Q9NWH7 488 aaPredicted RBP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 CHORDC1Q9UHD1 332 aaPredicted RBP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 NAGPAQ9UK23 515 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDHR3-214ENST00000496633 CPQQ9Y646 472 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 PATJQ8NI35 1801 aa7.99□□□□□ -1.13
CDHR3-214ENST00000496633 KMT2EQ8IZD2 1858 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 ANAPC1Q9H1A4 1944 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 C2orf78A6NCI8 922 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 HHLA1C9JL84 531 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 TRDMT1O14717 391 aaKnown RBP7.98□□□□□ -1.13
CDHR3-214ENST00000496633 COCHO43405 550 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 LATS1O95835 1130 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 PDGFBP01127 241 aaPredicted RBP7.98□□□□□ -1.13
CDHR3-214ENST00000496633 CYBBP04839 570 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 RARGP13631 454 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 PON1P27169 355 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 GNA15P30679 374 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 CNR2P34972 360 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 KRT9P35527 623 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 TKTL1P51854 596 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 ZNF132P52740 706 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 CACNA2D1P54289 1103 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 VCPP55072 806 aaKnown RBP7.98□□□□□ -1.13
CDHR3-214ENST00000496633 YWHAGP61981 247 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDHR3-214ENST00000496633 GAD2Q05329 585 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 PDE4CQ08493 712 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 ORC1Q13415 861 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 CCDC142Q17RM4 750 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 GOLGA7BQ2TAP0 167 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 KLHL40Q2TBA0 621 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 C10orf120Q5SQS8 335 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 PPP1R2P3Q6NXS1 205 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 HTR3DQ70Z44 454 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 RRAGAQ7L523 313 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 TRMT11Q7Z4G4 463 aaKnown RBP7.98□□□□□ -1.13
CDHR3-214ENST00000496633 ZNF677Q86XU0 584 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 IRF2BP1Q8IU81 584 aa7.98□□□□□ -1.13
CDHR3-214ENST00000496633 ZDHHC17Q8IUH5 632 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms