RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ERMP1Q7Z2K6 904 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
VTI1A-209ENST00000496445 FAM160A2Q8N612 972 aaPredicted RBP15.09■□□□□ 0.01
VTI1A-209ENST00000496445 GPR161Q8N6U8 529 aaKnown RBP15.09■□□□□ 0.01
VTI1A-209ENST00000496445 FBXL13Q8NEE6 735 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 GAB3Q8WWW8 586 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 CYFIP2Q96F07 1278 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 GSDMAQ96QA5 445 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 ARID3AQ99856 593 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 OSER1Q9NX31 292 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 PCDHA5Q9Y5H7 936 aa15.09■□□□□ 0.01
VTI1A-209ENST00000496445 E2F8A0AVK6 867 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 GREM1O60565 184 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 TLR5O60602 858 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 SLC6A11P48066 632 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 SEC13P55735 322 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 DMC1Q14565 340 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 PPP1R26Q5T8A7 1209 aaPredicted RBP15.08■□□□□ 0
VTI1A-209ENST00000496445 ANKRD40Q6AI12 368 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 CAMKK1Q8N5S9 505 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 CCDC150Q8NCX0 1101 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 USP33Q8TEY7 942 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 ACDQ96AP0 544 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 DUSP9Q99956 384 aaKnown RBP15.08■□□□□ 0
VTI1A-209ENST00000496445 FBXO44Q9H4M3 255 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 NMUR1Q9HB89 426 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 PNPLA8Q9NP80 782 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 RAB20Q9NX57 234 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 SCML2Q9UQR0 700 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 NCOR2Q9Y618 2525 aa15.08■□□□□ 0
VTI1A-209ENST00000496445 GOLGA6L4A6NEF3 574 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 LRP3O75074 770 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 RPP40O75818 363 aaKnown RBP15.07■□□□□ 0
VTI1A-209ENST00000496445 TBX18O95935 607 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 ADH1CP00326 375 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 IRF1P10914 325 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 ADH5P11766 374 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 EIF2DP41214 584 aaKnown RBP15.07■□□□□ 0
VTI1A-209ENST00000496445 FOXK2Q01167 660 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 LMNB2Q03252 620 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 KDSRQ06136 332 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 PUM1Q14671 1186 aaKnown RBP eCLIP15.07■□□□□ 0
VTI1A-209ENST00000496445 ZNF394Q53GI3 561 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 DCAF17Q5H9S7 520 aaPredicted RBP15.07■□□□□ 0
VTI1A-209ENST00000496445 LY6G5CQ5SRR4 150 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 CEP68Q76N32 757 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 BBS7Q8IWZ6 715 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 PHTF2Q8N3S3 785 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 SLC4A11Q8NBS3 891 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 TATDN2Q93075 761 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 SMARCE1Q969G3 411 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 TIGD1Q96MW7 591 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 CYLDQ9NQC7 956 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 TLR8Q9NR97 1041 aaKnown RBP15.07■□□□□ 0
VTI1A-209ENST00000496445 CISHQ9NSE2 258 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 TBC1D14Q9P2M4 693 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 SH3BP1Q9Y3L3 701 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.07■□□□□ 0
VTI1A-209ENST00000496445 SDK1Q7Z5N4 2213 aa15.07■□□□□ 0
VTI1A-209ENST00000496445 PLXND1Q9Y4D7 1925 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 A0A1W2PQH9 124 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 STX10O60499 249 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 KAT7O95251 611 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 SMC2O95347 1197 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
VTI1A-209ENST00000496445 TRIM21P19474 475 aaKnown RBP15.06■□□□□ 0
VTI1A-209ENST00000496445 ACO1P21399 889 aaKnown RBP15.06■□□□□ 0
VTI1A-209ENST00000496445 KIF11P52732 1056 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 RAD23BP54727 409 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 C2orf27AQ580R0 203 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 DGLUCYQ7Z3D6 616 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 KBTBD6Q86V97 674 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 ETFBKMTQ8IXQ9 262 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 SLC35C1Q96A29 364 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 OTUB2Q96DC9 234 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 FAXDC2Q96IV6 333 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 PNKPQ96T60 521 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 TSG101Q99816 390 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 KLF16Q9BXK1 252 aaPredicted RBP15.06■□□□□ 0
VTI1A-209ENST00000496445 DUSP16Q9BY84 665 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 SEMA4GQ9NTN9 838 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 COQ4Q9Y3A0 265 aa15.06■□□□□ 0
VTI1A-209ENST00000496445 MED19A0JLT2 244 aaPredicted RBP15.05■□□□□ -0
VTI1A-209ENST00000496445 PRR5-ARHGAP8B1AHC4 643 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 MDM4O15151 490 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 AXIN1O15169 862 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 HOXC11O43248 304 aaPredicted RBP15.05■□□□□ -0
VTI1A-209ENST00000496445 EPN2O95208 641 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 APBB3O95704 486 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 CCDC192P0DO97 292 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 HNRNPLP14866 589 aaKnown RBP eCLIP15.05■□□□□ -0
VTI1A-209ENST00000496445 ARHGAP8P85298 464 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 FKBP3Q00688 224 aaKnown RBP15.05■□□□□ -0
VTI1A-209ENST00000496445 LRRC63Q05C16 580 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 TCERG1LQ5VWI1 586 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 CCDC186Q7Z3E2 898 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 CACNA2D4Q7Z3S7 1137 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 SCD5Q86SK9 330 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 TMEM176AQ96HP8 235 aa15.05■□□□□ -0
VTI1A-209ENST00000496445 NACA2Q9H009 215 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms