RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 DHCR24Q15392 516 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 CT47A1Q5JQC4 288 aaPredicted RBP15.24■□□□□ 0.03
CXCL12-208ENST00000496375 CEP135Q66GS9 1140 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 ISM2Q6H9L7 571 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 PAQR9Q6ZVX9 377 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 DDX42Q86XP3 938 aaKnown RBP eCLIP15.24■□□□□ 0.03
CXCL12-208ENST00000496375 FAM186BQ8IYM0 893 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 PDZD8Q8NEN9 1154 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 TSTD1Q8NFU3 115 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 OVCA2Q8WZ82 227 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 TNIP3Q96KP6 325 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 CEP63Q96MT8 703 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 DUSP9Q99956 384 aaKnown RBP15.24■□□□□ 0.03
CXCL12-208ENST00000496375 SDCBP2Q9H190 292 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 SMOC1Q9H4F8 434 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 CHORDC1Q9UHD1 332 aaPredicted RBP15.24■□□□□ 0.03
CXCL12-208ENST00000496375 PCDHGA5Q9Y5G8 931 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 TRIM49BA6NDI0 452 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 TNFRSF10BO14763 440 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 COCHO43405 550 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 AP1G2O75843 785 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 ADRB1P08588 477 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 PTMSP20962 102 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 KCNA4P22459 653 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 MPLP40238 635 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 SLC6A11P48066 632 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 SLC5A3P53794 718 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 ELF2Q15723 593 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 PLA2G2CQ5R387 149 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 IL31Q6EBC2 164 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 ACOT1Q86TX2 421 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 SCAMP5Q8TAC9 235 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 NELFBQ8WX92 580 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 SMARCD1Q96GM5 515 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 CNTNAP3BQ96NU0 1288 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 CNTNAP3Q9BZ76 1288 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 TPSD1Q9BZJ3 242 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 DMAP1Q9NPF5 467 aaPredicted RBP15.23■□□□□ 0.03
CXCL12-208ENST00000496375 RXFP3Q9NSD7 469 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 RWDD2AQ9UIY3 292 aa15.23■□□□□ 0.03
CXCL12-208ENST00000496375 TPRP12270 2363 aaKnown RBP15.22■□□□□ 0.03
CXCL12-208ENST00000496375 MYH10P35580 1976 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 E2F8A0AVK6 867 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 RHOBTB1O94844 696 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 ADH5P11766 374 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 P4HA1P13674 534 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 GBP1P32455 592 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 GTF2H1P32780 548 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 VAMP7P51809 220 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 LIMK1P53667 647 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 MARSP56192 900 aaKnown RBP15.22■□□□□ 0.03
CXCL12-208ENST00000496375 ORC1Q13415 861 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 SGSM1Q2NKQ1 1148 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 ZACNQ401N2 412 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 HECTD3Q5T447 861 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 CCDC183Q5T5S1 534 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 RHBDF2Q6PJF5 856 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 C12orf40Q86WS4 652 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 FUKQ8N0W3 1084 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 CCDC33Q8N5R6 958 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 ZFRQ96KR1 1074 aaKnown RBP15.22■□□□□ 0.03
CXCL12-208ENST00000496375 MED15Q96RN5 788 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 CCSER2Q9H7U1 834 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 VPS45Q9NRW7 570 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 KRT82Q9NSB4 513 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 GMIPQ9P107 970 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 TBC1D14Q9P2M4 693 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 MMP17Q9ULZ9 603 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 CTNND2Q9UQB3 1225 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 INVSQ9Y283 1065 aa15.22■□□□□ 0.03
CXCL12-208ENST00000496375 CNOT1A5YKK6 2376 aaKnown RBP15.21■□□□□ 0.03
CXCL12-208ENST00000496375 KAT7O95251 611 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 ADH1CP00326 375 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 APODP05090 189 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 EPB41P11171 864 aaKnown RBP15.21■□□□□ 0.03
CXCL12-208ENST00000496375 CCDC130P13994 396 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 ERCC5P28715 1186 aaPredicted RBP15.21■□□□□ 0.03
CXCL12-208ENST00000496375 EIF2DP41214 584 aaKnown RBP15.21■□□□□ 0.03
CXCL12-208ENST00000496375 NDST1P52848 882 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 MRPS21P82921 87 aaKnown RBP15.21■□□□□ 0.03
CXCL12-208ENST00000496375 MESP2Q0VG99 397 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 KLHL40Q2TBA0 621 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 DPCR1Q3MIW9 517 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 SNX30Q5VWJ9 437 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 ANO7Q6IWH7 933 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 KLHL10Q6JEL2 608 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 SV2AQ7L0J3 742 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 RASSF3Q86WH2 238 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 ABCA7Q8IZY2 2146 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 ZMIZ2Q8NF64 920 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 DDX1Q92499 740 aaKnown RBP15.21■□□□□ 0.03
CXCL12-208ENST00000496375 PNKPQ96T60 521 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 SMOQ99835 787 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 IL37Q9NZH6 218 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 TMEM63CQ9P1W3 806 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 HMGXB4Q9UGU5 601 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 SH3BP1Q9Y3L3 701 aa15.21■□□□□ 0.03
CXCL12-208ENST00000496375 FAM92AA1XBS5 289 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms