RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 LRRC26Q2I0M4 334 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FAM153CQ494X1 144 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 SND1Q7KZF4 910 aaKnown RBP eCLIP17.12■□□□□ 0.333e-14■■■■□ 20
HLA-A-208ENST00000496081 FAM149B1Q96BN6 582 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 NCAPGQ9BPX3 1015 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FAM118BQ9BPY3 351 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 COLEC11Q9BWP8 271 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 MRPL9Q9BYD2 267 aaKnown RBP17.12■□□□□ 0.33
HLA-A-208ENST00000496081 TRIM31Q9BZY9 425 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 MARCH5Q9NX47 278 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FAM53CQ9NYF3 392 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FAM153AQ9UHL3 310 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 SYN3O14994 580 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 DAB1O75553 588 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FBXO21O94952 628 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 ECEL1O95672 775 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 ARSEP51690 589 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 DAOAP59103 153 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 IKBKEQ14164 716 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 HLTFQ14527 1009 aaKnown RBP eCLIP17.12■□□□□ 0.33
HLA-A-208ENST00000496081 BOLA3Q53S33 107 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 CNKSR3Q6P9H4 555 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 HFE2Q6ZVN8 426 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.12■□□□□ 0.33
HLA-A-208ENST00000496081 CAVIN3Q969G5 261 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 NEUROG2Q9H2A3 272 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
HLA-A-208ENST00000496081 CNGB3Q9NQW8 809 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FAM114A2Q9NRY5 505 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FAN1Q9Y2M0 1017 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 KIAA0100Q14667 2235 aaKnown RBP17.11■□□□□ 0.33
HLA-A-208ENST00000496081 OR4Q2P0C623 313 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 ATXN1P54253 815 aaKnown RBP17.11■□□□□ 0.33
HLA-A-208ENST00000496081 DRG2P55039 364 aaKnown RBP17.11■□□□□ 0.33
HLA-A-208ENST00000496081 SLC25A52Q3SY17 297 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 VARS2Q5ST30 1063 aaKnown RBP17.11■□□□□ 0.33
HLA-A-208ENST00000496081 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 ATL2Q8NHH9 583 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 TEKT4Q8WW24 435 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 TBCBQ99426 244 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 TMEM175Q9BSA9 504 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 ZCWPW1Q9H0M4 648 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 CALCOCO1Q9P1Z2 691 aa17.11■□□□□ 0.33
HLA-A-208ENST00000496081 YJEFN3A6XGL0 299 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 E7ENQ6 273 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 UPP2O95045 317 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 ZBED1O96006 694 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 GALTP07902 379 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 NOS2P35228 1153 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 RFC2P35250 354 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 CDH6P55285 790 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 MRPL58Q14197 206 aaKnown RBP17.1■□□□□ 0.33
HLA-A-208ENST00000496081 DCAF6Q58WW2 860 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 C4orf50Q6ZRC1 276 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 BBS12Q6ZW61 710 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 STRADAQ7RTN6 431 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 CEP57Q86XR8 500 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 SPATA2LQ8IUW3 424 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-208ENST00000496081 NT5C3BQ969T7 300 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 ABHD8Q96I13 439 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 SNRNP25Q9BV90 132 aaKnown RBP17.1■□□□□ 0.33
HLA-A-208ENST00000496081 CALN1Q9BXU9 219 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 POPDC2Q9HBU9 364 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 FEZ2Q9UHY8 353 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-208ENST00000496081 SNX24Q9Y343 169 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 NT5C1B-RDH14C9J2C7 533 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 LIASO43766 372 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 FYNP06241 537 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 FGFR3P22607 806 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 ITGB8P26012 769 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 PBX3P40426 434 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 SULT1E1P49888 294 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 NNTQ13423 1086 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 ZC3H12AQ5D1E8 599 aaKnown RBP17.1■□□□□ 0.33
HLA-A-208ENST00000496081 OTUD1Q5VV17 481 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-208ENST00000496081 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 DRICH1Q6PGQ1 229 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-208ENST00000496081 BHLHA9Q7RTU4 235 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 BNIPLQ7Z465 357 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 GRK7Q8WTQ7 553 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 NPY6RQ99463 290 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 GPATCH2LQ9NWQ4 482 aa17.1■□□□□ 0.33
HLA-A-208ENST00000496081 MDM4O15151 490 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 CST8O60676 142 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 CYP2F1P24903 491 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 RPL21P46778 160 aaKnown RBP17.09■□□□□ 0.33
HLA-A-208ENST00000496081 DYNLT1P63172 113 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 PITX1P78337 314 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-208ENST00000496081 KRT17Q04695 432 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 MMRN1Q13201 1228 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 DPYSL3Q14195 570 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 PDK2Q15119 407 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 PPP1R7Q15435 360 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms