RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 GMIPQ9P107 970 aa13.04□□□□□ -0.32
MRPL55-233ENST00000495899 TMEM63CQ9P1W3 806 aa13.04□□□□□ -0.32
MRPL55-233ENST00000495899 APEX2Q9UBZ4 518 aa13.04□□□□□ -0.32
MRPL55-233ENST00000495899 TSPAN16Q9UKR8 245 aa13.04□□□□□ -0.32
MRPL55-233ENST00000495899 PIAS3Q9Y6X2 628 aa13.04□□□□□ -0.32
MRPL55-233ENST00000495899 FAM170BA6NMN3 283 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 XPO1O14980 1071 aaKnown RBP13.03□□□□□ -0.32
MRPL55-233ENST00000495899 COCHO43405 550 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 LETM1O95202 739 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-233ENST00000495899 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 MAGEA9P43362 315 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-233ENST00000495899 AMPD2Q01433 879 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 MYL5Q02045 173 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 BST2Q10589 180 aaKnown RBP13.03□□□□□ -0.32
MRPL55-233ENST00000495899 USP4Q13107 963 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 RUNX3Q13761 415 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 MTF1Q14872 753 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 RAB41Q5JT25 222 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 TADA2BQ86TJ2 420 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 PIGZQ86VD9 579 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 TTC30AQ86WT1 665 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 ARHGAP18Q8N392 663 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 OSCP1Q8WVF1 389 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 KCTD13Q8WZ19 329 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 TFAP2BQ92481 460 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 FAM3CQ92520 227 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 LTB4R2Q9NPC1 389 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 CYLDQ9NQC7 956 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 PTPRDP23468 1912 aa13.03□□□□□ -0.32
MRPL55-233ENST00000495899 SHISA7A6NL88 538 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 LEFTY2O00292 366 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 TPM2P07951 284 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 PLA2G4AP47712 749 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 ZXDBP98169 803 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 TYRO3Q06418 890 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 PDE4CQ08493 712 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 UBXN2BQ14CS0 331 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 MEA1Q16626 185 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 PM20D1Q6GTS8 502 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 KLHDC10Q6PID8 442 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 C11orf57Q6ZUT1 292 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 SCML4Q8N228 414 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 RIN3Q8TB24 985 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 ATP2A3Q93084 1043 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 CLDN23Q96B33 292 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 HS3ST6Q96QI5 342 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 CDK5RAP1Q96SZ6 601 aaKnown RBP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 FOXQ1Q9C009 403 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 NACA2Q9H009 215 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 GTSE1Q9NYZ3 720 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 CLIC5Q9NZA1 410 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 DLGAP2Q9P1A6 1054 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.02□□□□□ -0.33
MRPL55-233ENST00000495899 CPQQ9Y646 472 aa13.02□□□□□ -0.33
MRPL55-233ENST00000495899 E2F8A0AVK6 867 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 LRRC10BA6NIK2 292 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 SPECC1L-ADORA2AF8WAN1 911 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 CYP26A1O43174 497 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 MED7O43513 233 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 TLR5O60602 858 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 ZBED1O96006 694 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 RALAP11233 206 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 KRT5P13647 590 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 CD72P21854 359 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 IFNAR2P48551 515 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 TKTL1P51854 596 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 TNK2Q07912 1038 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 NR1H3Q13133 447 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 CAVIN1Q6NZI2 390 aaKnown RBP13.01□□□□□ -0.33
MRPL55-233ENST00000495899 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 DTWD2Q8NBA8 298 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 ANKRD20A12PQ8NF67 263 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 SLC35F5Q8WV83 523 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 SHC3Q92529 594 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 EXOC4Q96A65 974 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 BPIFA3Q9BQP9 254 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 ZSWIM1Q9BR11 485 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 EBF3Q9H4W6 596 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 CCSER2Q9H7U1 834 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 SIX2Q9NPC8 291 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 HPS4Q9NQG7 708 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
MRPL55-233ENST00000495899 TBC1D14Q9P2M4 693 aa13.01□□□□□ -0.33
MRPL55-233ENST00000495899 MTF2Q9Y483 593 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms