RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SLC8A2Q9UPR5 921 aa25.57■■□□□ 1.68
HLA-C-209ENST00000495835 SH3BP1Q9Y3L3 701 aa25.57■■□□□ 1.68
HLA-C-209ENST00000495835 SPTBN4Q9H254 2564 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 PPP1R3GB7ZBB8 358 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 GADD45BO75293 160 aaPredicted RBP25.56■■□□□ 1.68
HLA-C-209ENST00000495835 CYP17A1P05093 508 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 CD44P16070 742 aaKnown RBP25.56■■□□□ 1.68
HLA-C-209ENST00000495835 ACO1P21399 889 aaKnown RBP25.56■■□□□ 1.68
HLA-C-209ENST00000495835 TBXAS1P24557 533 aaPredicted RBP25.56■■□□□ 1.68
HLA-C-209ENST00000495835 ATP5C1P36542 298 aaKnown RBP25.56■■□□□ 1.68
HLA-C-209ENST00000495835 OPRD1P41143 372 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 FNTBP49356 437 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 KIF11P52732 1056 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 RAD23BP54727 409 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 ZNF394Q53GI3 561 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 SYT13Q7L8C5 426 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 ACDQ96AP0 544 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 USP3Q9Y6I4 520 aa25.56■■□□□ 1.68
HLA-C-209ENST00000495835 MYO16Q9Y6X6 1858 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 P4HA2O15460 535 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 SLC8A3P57103 927 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 GOLGA8FQ08AF8 430 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 GOLGA8DPQ0D2H9 430 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 CETN1Q12798 172 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 CUL2Q13617 745 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 GAB4Q2WGN9 574 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 LAIR1Q6GTX8 287 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 ISM2Q6H9L7 571 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 TTI2Q6NXR4 508 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 RHBDF2Q6PJF5 856 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 HTR3DQ70Z44 454 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 CCDC186Q7Z3E2 898 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 TADA2BQ86TJ2 420 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 TRIML1Q8N9V2 468 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 CDK5RAP1Q96SZ6 601 aaKnown RBP25.55■■□□□ 1.68
HLA-C-209ENST00000495835 C2orf42Q9NWW7 574 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 KIAA1257Q9ULG3 409 aa25.55■■□□□ 1.68
HLA-C-209ENST00000495835 ATG2BQ96BY7 2078 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 A0A0A0MRY4 1105 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 GNA14O95837 355 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 BMP6P22004 513 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 FMO5P49326 533 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 UBE2HP62256 183 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 PREPLQ4J6C6 727 aaPredicted RBP25.54■■□□□ 1.68
HLA-C-209ENST00000495835 PKN3Q6P5Z2 889 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 GPRIN1Q7Z2K8 1008 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 ANKRD52Q8NB46 1076 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 EZH1Q92800 747 aaPredicted RBP25.54■■□□□ 1.68
HLA-C-209ENST00000495835 CLIC5Q9NZA1 410 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 CHMP5Q9NZZ3 219 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 GMEB2Q9UKD1 530 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 DMXL1Q9Y485 3027 aa25.54■■□□□ 1.68
HLA-C-209ENST00000495835 KIAA1549LQ6ZVL6 1849 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.53■■□□□ 1.68
HLA-C-209ENST00000495835 HRO43593 1189 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 GAD2Q05329 585 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 SIM2Q14190 667 aaPredicted RBP25.53■■□□□ 1.68
HLA-C-209ENST00000495835 CCDC40Q4G0X9 1142 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 NAIF1Q69YI7 327 aaPredicted RBP25.53■■□□□ 1.68
HLA-C-209ENST00000495835 RPLP0P6Q8NHW5 317 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 NELFBQ8WX92 580 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 PNKPQ96T60 521 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 ARID3AQ99856 593 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 KLF16Q9BXK1 252 aaPredicted RBP25.53■■□□□ 1.68
HLA-C-209ENST00000495835 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.53■■□□□ 1.68
HLA-C-209ENST00000495835 GPR179Q6PRD1 2367 aa25.53■■□□□ 1.68
HLA-C-209ENST00000495835 LRP3O75074 770 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 ADH5P11766 374 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 MARSP56192 900 aaKnown RBP25.52■■□□□ 1.68
HLA-C-209ENST00000495835 DMWDQ09019 674 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 RAB41Q5JT25 222 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 KLHL10Q6JEL2 608 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 ARHGAP18Q8N392 663 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 DCLK2Q8N568 766 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 DNMT3LQ9UJW3 386 aa25.52■■□□□ 1.68
HLA-C-209ENST00000495835 K7EQS6 105 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 CYP26A1O43174 497 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 RETP07949 1114 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 RARGP13631 454 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 PLA2G4AP47712 749 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 PGFP49763 221 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 MRPS21P82921 87 aaKnown RBP25.51■■□□□ 1.67
HLA-C-209ENST00000495835 PAK1Q13153 545 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 HSF5Q4G112 596 aaPredicted RBP25.51■■□□□ 1.67
HLA-C-209ENST00000495835 SGO2Q562F6 1265 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 HEATR6Q6AI08 1181 aaKnown RBP25.51■■□□□ 1.67
HLA-C-209ENST00000495835 KIAA2013Q8IYS2 634 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 SPHK2Q9NRA0 654 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 OSER1Q9NX31 292 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 LSM7Q9UK45 103 aaKnown RBP25.51■■□□□ 1.67
HLA-C-209ENST00000495835 MYOFQ9NZM1 2061 aa25.51■■□□□ 1.67
HLA-C-209ENST00000495835 A0A1W2PQH9 124 aa25.5■■□□□ 1.67
HLA-C-209ENST00000495835 HOXC11O43248 304 aaPredicted RBP25.5■■□□□ 1.67
HLA-C-209ENST00000495835 FGFR1OPO95684 399 aaKnown RBP25.5■■□□□ 1.67
HLA-C-209ENST00000495835 RALAP11233 206 aa25.5■■□□□ 1.67
HLA-C-209ENST00000495835 LY6G5CQ5SRR4 150 aa25.5■■□□□ 1.67
HLA-C-209ENST00000495835 BTBD8Q5XKL5 378 aa25.5■■□□□ 1.67
HLA-C-209ENST00000495835 UBR7Q8N806 425 aa25.5■■□□□ 1.67
HLA-C-209ENST00000495835 USP33Q8TEY7 942 aa25.5■■□□□ 1.67
HLA-C-209ENST00000495835 JAKMIP2Q96AA8 810 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms