RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 MBL2P11226 248 aaPredicted RBP20.42■□□□□ 0.86
HDAC4-212ENST00000495497 RARGP13631 454 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 RPL34P49207 117 aaKnown RBP20.42■□□□□ 0.86
HDAC4-212ENST00000495497 DAOAP59103 153 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 YWHAGP61981 247 aaKnown RBP eCLIP20.42■□□□□ 0.86
HDAC4-212ENST00000495497 GPC5P78333 572 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 ZXDAP98168 799 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 ZXDBP98169 803 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 PDCLQ13371 301 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 HFE2Q6ZVN8 426 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 MFSD6LQ8IWD5 586 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 CELF5Q8N6W0 485 aaKnown RBP20.42■□□□□ 0.86
HDAC4-212ENST00000495497 CPLX3Q8WVH0 158 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 CPXM1Q96SM3 734 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 EPHX3Q9H6B9 360 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.42■□□□□ 0.86
HDAC4-212ENST00000495497 SMPD4Q9NXE4 827 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 CPQQ9Y646 472 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 E5RJQ4 531 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 TLR5O60602 858 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 OLFM2O95897 454 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 TPM3P06753 285 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 FMO1Q01740 532 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 E4F1Q66K89 784 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-212ENST00000495497 SCUBE3Q8IX30 993 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 STK32AQ8WU08 396 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 PPP1R13BQ96KQ4 1090 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 CNGB3Q9NQW8 809 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 DUSP12Q9UNI6 340 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 MYO10Q9HD67 2058 aa20.41■□□□□ 0.86
HDAC4-212ENST00000495497 PI4K2BG5E9Z4 385 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 FERP16591 822 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 PSMC3P17980 439 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 GDI1P31150 447 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 ACADSBP45954 432 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 TUBP50607 506 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 SLC7A9P82251 487 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 CDR2Q01850 454 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 ZNF268Q14587 947 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-212ENST00000495497 DENND4CQ5VZ89 1909 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 IRF2BP2Q7Z5L9 587 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 TMEM110Q86TL2 294 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 ZNF677Q86XU0 584 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 BPIFB1Q8TDL5 484 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 SH3RF2Q8TEC5 729 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 EDEM1Q92611 657 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 E2F7Q96AV8 911 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 ZFYVE19Q96K21 471 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 PCDHB18PQ96TA0 734 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 NUP58Q9BVL2 599 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 TRMT61BQ9BVS5 477 aaKnown RBP20.4■□□□□ 0.86
HDAC4-212ENST00000495497 NACA2Q9H009 215 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 ANAPC1Q9H1A4 1944 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 CYLDQ9NQC7 956 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 GKN1Q9NS71 199 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 MYO6Q9UM54 1294 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 ARHGAP26Q9UNA1 814 aa20.4■□□□□ 0.86
HDAC4-212ENST00000495497 TTC28Q96AY4 2481 aa20.39■□□□□ 0.86
HDAC4-212ENST00000495497 LEFTY2O00292 366 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 PAPSS1O43252 624 aaPredicted RBP20.39■□□□□ 0.85
HDAC4-212ENST00000495497 ERBB2P04626 1255 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 RALAP11233 206 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 SRFP11831 508 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 PFKLP17858 780 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 PSEN1P49768 467 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 ZNF77Q15935 545 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 ASIC2Q16515 512 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 PTPN20Q4JDL3 420 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 FIGNQ5HY92 759 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 C10orf120Q5SQS8 335 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 IER5LQ5T953 404 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 SFMBT2Q5VUG0 894 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 BSPRYQ5W0U4 402 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 BTBD8Q5XKL5 378 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 YAF2Q8IY57 180 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 SCML4Q8N228 414 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 ARHGAP18Q8N392 663 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 TMEM35BQ8NCS4 154 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 DEPDC1BQ8WUY9 529 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 CPA5Q8WXQ8 436 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 EDAQ92838 391 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 WBP2Q969T9 261 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 ZFRQ96KR1 1074 aaKnown RBP20.39■□□□□ 0.85
HDAC4-212ENST00000495497 EDEM3Q9BZQ6 932 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 OBP2AQ9NY56 170 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 CLIC5Q9NZA1 410 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 CEP83Q9Y592 693 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 MYO16Q9Y6X6 1858 aa20.39■□□□□ 0.85
HDAC4-212ENST00000495497 ITIH6Q6UXX5 1313 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 SCAMP3O14828 347 aaKnown RBP20.38■□□□□ 0.85
HDAC4-212ENST00000495497 FBXO21O94952 628 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 GYPCP04921 128 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 ALADP13716 330 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 CDH5P33151 784 aaPredicted RBP20.38■□□□□ 0.85
HDAC4-212ENST00000495497 ATP5C1P36542 298 aaKnown RBP20.38■□□□□ 0.85
HDAC4-212ENST00000495497 FCHO2Q0JRZ9 810 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 USP4Q13107 963 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 NAA35Q5VZE5 725 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 VSTM4Q8IW00 320 aa20.38■□□□□ 0.85
HDAC4-212ENST00000495497 UBALD2Q8IYN6 164 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms