RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 LMO2P25791 158 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 PTPN9P43378 593 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 RGS7P49802 495 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 BCAR1P56945 870 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 GPM6BQ13491 265 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 TFDP2Q14188 446 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 CASP8Q14790 479 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 PPP1R7Q15435 360 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 ALS2CLQ60I27 953 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 PMF1Q6P1K2 205 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 C4orf50Q6ZRC1 276 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 FAM183BPQ6ZVS7 135 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SLC26A9Q7LBE3 791 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 ADAT2Q7Z6V5 191 aaKnown RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 TMCO2Q7Z6W1 182 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 TTC30AQ86WT1 665 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 DCP1BQ8IZD4 617 aaKnown RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SIX6OS1Q8N1H7 587 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SLC39A11Q8N1S5 342 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SLC2A14Q8TDB8 520 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 RXFP2Q8WXD0 754 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 ARNTL2Q8WYA1 636 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 MRPL38Q96DV4 380 aaKnown RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SMARCD1Q96GM5 515 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 IGSF21Q96ID5 467 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SUSD3Q96L08 255 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 SLITRK1Q96PX8 696 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 OXCT2Q9BYC2 517 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 TRIM7Q9C029 511 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 TTYH1Q9H313 450 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 DPEP3Q9H4B8 488 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 NRDE2Q9H7Z3 1164 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 MIOSQ9NXC5 875 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 MTMR10Q9NXD2 777 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.73□□□□□ -0.69
HDAC3-214ENST00000495485 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 STAP1Q9ULZ2 295 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 USP18Q9UMW8 372 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 IRAK3Q9Y616 596 aa10.73□□□□□ -0.69
HDAC3-214ENST00000495485 PLXNA4Q9HCM2 1894 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 LRRD1A4D1F6 860 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 C2CD4BA6NLJ0 364 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 TTI1O43156 1089 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 OPA1O60313 960 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 LPXNO60711 386 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 ZMYND10O75800 440 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 ZNF189O75820 626 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 FGF18O76093 207 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 TRUB2O95900 331 aaKnown RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 RARAP10276 462 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 RALAP11233 206 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 LCP1P13796 627 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 CCDC130P13994 396 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 ZFXP17010 805 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 IBSPP21815 317 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 MARCKSL1P49006 195 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 TAS2R40P59535 323 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 MDH1BQ5I0G3 518 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 SPDYCQ5MJ68 293 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 CFAP58Q5T655 872 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 OVOS1Q6IE37 1185 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 LLGL2Q6P1M3 1020 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 DRICH1Q6PGQ1 229 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 OLFML1Q6UWY5 402 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 SPOCD1Q6ZMY3 1216 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 SND1Q7KZF4 910 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 DDX53Q86TM3 631 aaKnown RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 JAMLQ86YT9 394 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 PRELID2Q8N945 189 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 CCDC89Q8N998 374 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 JOSD2Q8TAC2 188 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 MYCBPAPQ8TBZ2 947 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 AENQ8WTP8 325 aaKnown RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 HDAC7Q8WUI4 952 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 TEKT4Q8WW24 435 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 SEC14L1Q92503 715 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 CDCA3Q99618 268 aaPredicted RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 C17orf80Q9BSJ5 609 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 DCLK3Q9C098 648 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 MED4Q9NPJ6 270 aa10.72□□□□□ -0.69
HDAC3-214ENST00000495485 DRG1Q9Y295 367 aaKnown RBP10.72□□□□□ -0.69
HDAC3-214ENST00000495485 SF3B1O75533 1304 aaKnown RBP eCLIP10.72□□□□□ -0.695e-8■■■■■ 129.2
HDAC3-214ENST00000495485 MEIS3P2A8K0S8 358 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 ZNF487B1APH4 448 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 NRP1O14786 923 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 LRCH4O75427 683 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 AP1G2O75843 785 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 ITIH2P19823 946 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 KDELR1P24390 212 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 GATMP50440 423 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 COL4A4P53420 1690 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 YWHAHQ04917 246 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 SMARCB1Q12824 385 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 KRT81Q14533 505 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 BZW1Q7L1Q6 419 aaKnown RBP10.71□□□□□ -0.69
HDAC3-214ENST00000495485 STRADAQ7RTN6 431 aa10.71□□□□□ -0.69
HDAC3-214ENST00000495485 GSTA5Q7RTV2 222 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms