RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ALYREFQ86V81 257 aaKnown RBP18.58■□□□□ 0.56
HDAC4-211ENST00000494800 PIGZQ86VD9 579 aa18.58■□□□□ 0.56
HDAC4-211ENST00000494800 UBR7Q8N806 425 aa18.58■□□□□ 0.56
HDAC4-211ENST00000494800 OTUB2Q96DC9 234 aa18.58■□□□□ 0.56
HDAC4-211ENST00000494800 P2RY13Q9BPV8 354 aa18.58■□□□□ 0.56
HDAC4-211ENST00000494800 LRRC4Q9HBW1 653 aa18.58■□□□□ 0.56
HDAC4-211ENST00000494800 CYLDQ9NQC7 956 aa18.58■□□□□ 0.56
HDAC4-211ENST00000494800 ZNF638Q14966 1978 aaKnown RBP18.57■□□□□ 0.56
HDAC4-211ENST00000494800 A0A1W2PQH9 124 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 OTOL1A6NHN0 477 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-211ENST00000494800 PROB1E7EW31 1015 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 TRDMT1O14717 391 aaKnown RBP18.57■□□□□ 0.56
HDAC4-211ENST00000494800 XPO1O14980 1071 aaKnown RBP18.57■□□□□ 0.56
HDAC4-211ENST00000494800 RARGP13631 454 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 DRD1P21728 446 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 MFAP3P55082 362 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 ZXDBP98169 803 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 TMEM196Q5HYL7 178 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 KLHDC10Q6PID8 442 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 SPEM1Q8N4L4 309 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 RBBP8NLQ8NC74 664 aaPredicted RBP18.57■□□□□ 0.56
HDAC4-211ENST00000494800 CCDC26Q8TAB7 109 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 LINC00597Q9H2U6 94 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 SEMA4AQ9H3S1 761 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 CLIC5Q9NZA1 410 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 DNMT3LQ9UJW3 386 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 LSM7Q9UK45 103 aaKnown RBP18.57■□□□□ 0.56
HDAC4-211ENST00000494800 USP3Q9Y6I4 520 aa18.57■□□□□ 0.56
HDAC4-211ENST00000494800 KIF26AQ9ULI4 1882 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 GTPBP10A4D1E9 387 aaKnown RBP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 O00370 1275 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 ATG13O75143 517 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 ADH1CP00326 375 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 KRT5P13647 590 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 TKTL1P51854 596 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 NRLP54845 237 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 PDE4CQ08493 712 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 CCINQ13939 588 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 MAN2A1Q16706 1144 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 EXOC3L4Q17RC7 722 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 FBXO43Q4G163 708 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 RAB41Q5JT25 222 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 C10orf120Q5SQS8 335 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 SASS6Q6UVJ0 657 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 LCLAT1Q6UWP7 414 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 TTC30AQ86WT1 665 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 ARHGEF19Q8IW93 802 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 SIX6OS1Q8N1H7 587 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 GPT2Q8TD30 523 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 CD101Q93033 1021 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 NKD2Q969F2 451 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 MED15Q96RN5 788 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 PHOX2BQ99453 314 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 FAM126AQ9BYI3 521 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 UBE2TQ9NPD8 197 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 PRMT8Q9NR22 394 aaPredicted RBP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 RBM12Q9NTZ6 932 aaKnown RBP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDAC4-211ENST00000494800 ANAPC1Q9H1A4 1944 aa18.56■□□□□ 0.56
HDAC4-211ENST00000494800 ZBED1O96006 694 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 IRF1P10914 325 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 PLA2G4AP47712 749 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 CXCL12P48061 93 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 CNGA2Q16280 664 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 TRIM65Q6PJ69 517 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 RSRC2Q7L4I2 434 aaKnown RBP18.55■□□□□ 0.56
HDAC4-211ENST00000494800 MAML2Q8IZL2 1156 aaPredicted RBP18.55■□□□□ 0.56
HDAC4-211ENST00000494800 ADGRG2Q8IZP9 1017 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 ZNF276Q8N554 614 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 ATRIPQ8WXE1 791 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 KAT5Q92993 513 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 ZFRQ96KR1 1074 aaKnown RBP18.55■□□□□ 0.56
HDAC4-211ENST00000494800 CRACR2AQ9BSW2 395 aa18.55■□□□□ 0.56
HDAC4-211ENST00000494800 PATJQ8NI35 1801 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 M0QYV0 167 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 MED7O43513 233 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 GALK1P51570 392 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 BTBD8Q5XKL5 378 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 IRF2BP1Q8IU81 584 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 UBA3Q8TBC4 463 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 KCTD13Q8WZ19 329 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 NMUR1Q9HB89 426 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 APEX2Q9UBZ4 518 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 STRIP2Q9ULQ0 834 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDAC4-211ENST00000494800 PCDHGA2Q9Y5H1 932 aa18.54■□□□□ 0.56
HDAC4-211ENST00000494800 HELZP42694 1942 aaKnown RBP18.54■□□□□ 0.56
HDAC4-211ENST00000494800 PES1O00541 588 aaKnown RBP18.53■□□□□ 0.56
HDAC4-211ENST00000494800 SCAMP3O14828 347 aaKnown RBP18.53■□□□□ 0.56
HDAC4-211ENST00000494800 GFRA3O60609 400 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 TBX18O95935 607 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 CYP17A1P05093 508 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 TPM2P07951 284 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 PGFP49763 221 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 YWHAGP61981 247 aaKnown RBP eCLIP18.53■□□□□ 0.56
HDAC4-211ENST00000494800 COG7P83436 770 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 GAD2Q05329 585 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 DHCR24Q15392 516 aa18.53■□□□□ 0.56
HDAC4-211ENST00000494800 PREPLQ4J6C6 727 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-211ENST00000494800 VWA3BQ502W6 1294 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms