RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 COL4A3Q01955 1670 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 FAM92AA1XBS5 289 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 GRAP2O75791 330 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 OAS1P00973 400 aaKnown RBP11.69□□□□□ -0.54
APTX-230ENST00000494649 GYPCP04921 128 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 HMBSP08397 361 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 RARGP13631 454 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 CHRNB2P17787 502 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 BPIFB4P59827 614 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 YWHAGP61981 247 aaKnown RBP eCLIP11.69□□□□□ -0.54
APTX-230ENST00000494649 TDGQ13569 410 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 TAF5Q15542 800 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 C10orf120Q5SQS8 335 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 HECTD3Q5T447 861 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 NAA35Q5VZE5 725 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 TRIM68Q6AZZ1 485 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 MTSS1LQ765P7 747 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 BHLHA9Q7RTU4 235 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 SLC30A5Q8TAD4 765 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 FAM149B1Q96BN6 582 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 CEP295NLQ96MC4 621 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 EPHX3Q9H6B9 360 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 SYNCQ9H7C4 482 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 SORCS3Q9UPU3 1222 aa11.69□□□□□ -0.54
APTX-230ENST00000494649 ZFP37Q9Y6Q3 630 aaPredicted RBP11.69□□□□□ -0.54
APTX-230ENST00000494649 FAM86C2PA6NEL3 165 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 ERBB2P04626 1255 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 TPM3P06753 285 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 GDI1P31150 447 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 CASP14P31944 242 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 FMO1Q01740 532 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 TNK2Q07912 1038 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 PTPN20Q4JDL3 420 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 RSRC2Q7L4I2 434 aaKnown RBP11.68□□□□□ -0.54
APTX-230ENST00000494649 CCDC186Q7Z3E2 898 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 PDZD8Q8NEN9 1154 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 SH3RF2Q8TEC5 729 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 KCTD13Q8WZ19 329 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 PPP1R13BQ96KQ4 1090 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 PCDHB18PQ96TA0 734 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 IGSF9Q9P2J2 1179 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 DENND4CQ5VZ89 1909 aa11.68□□□□□ -0.54
APTX-230ENST00000494649 TMCO5BA8MYB1 307 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
APTX-230ENST00000494649 CBFA2T2O43439 604 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 ZDHHC11BP0C7U3 371 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 DAOAP59103 153 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 EFEMP1Q12805 493 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 ASIC2Q16515 512 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 BSPRYQ5W0U4 402 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 WBP2Q969T9 261 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 ELSPBP1Q96BH3 223 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 ASIC4Q96FT7 647 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 UBXN6Q9BZV1 441 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.67□□□□□ -0.54
APTX-230ENST00000494649 SFMBT1Q9UHJ3 866 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 RASAL2Q9UJF2 1139 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 CA14Q9ULX7 337 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 CEP83Q9Y592 693 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 LEFTY2O00292 366 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 DCXO43602 365 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 ECI2O75521 394 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 PSMC3P17980 439 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
APTX-230ENST00000494649 CDR2Q01850 454 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 BTBD8Q5XKL5 378 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 PM20D1Q6GTS8 502 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 OR6B2Q6IFH4 312 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 FAM183BPQ6ZVS7 135 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 TMC6Q7Z403 805 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 IRF2BP2Q7Z5L9 587 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 YAF2Q8IY57 180 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 CELF5Q8N6W0 485 aaKnown RBP11.67□□□□□ -0.54
APTX-230ENST00000494649 ADAM32Q8TC27 787 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 BPIFB1Q8TDL5 484 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 OVCA2Q8WZ82 227 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 HSFY1Q96LI6 401 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 TRMT61BQ9BVS5 477 aaKnown RBP11.67□□□□□ -0.54
APTX-230ENST00000494649 SLC4A5Q9BY07 1137 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 HAUS4Q9H6D7 363 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 BRD9Q9H8M2 597 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 CNGB3Q9NQW8 809 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 GTSE1Q9NYZ3 720 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 CFAP97Q9P2B7 532 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 WNT6Q9Y6F9 365 aa11.67□□□□□ -0.54
APTX-230ENST00000494649 MSI1O43347 362 aaKnown RBP11.66□□□□□ -0.54
APTX-230ENST00000494649 PLEKP08567 350 aaPredicted RBP11.66□□□□□ -0.54
APTX-230ENST00000494649 CD72P21854 359 aa11.66□□□□□ -0.54
APTX-230ENST00000494649 PPP3CCP48454 512 aa11.66□□□□□ -0.54
APTX-230ENST00000494649 ADKP55263 362 aaKnown RBP11.66□□□□□ -0.54
APTX-230ENST00000494649 RNASE9P60153 205 aaKnown RBP11.66□□□□□ -0.54
APTX-230ENST00000494649 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
APTX-230ENST00000494649 SPECC1LQ69YQ0 1117 aa11.66□□□□□ -0.54
APTX-230ENST00000494649 MMS22LQ6ZRQ5 1243 aa11.66□□□□□ -0.54
APTX-230ENST00000494649 VSTM4Q8IW00 320 aa11.66□□□□□ -0.54
APTX-230ENST00000494649 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
APTX-230ENST00000494649 AGPAT1Q99943 283 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms