RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RMND1Q9NWS8 449 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 COMMD8Q9NX08 183 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 RAB20Q9NX57 234 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 SH3BP1Q9Y3L3 701 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 PCDHA5Q9Y5H7 936 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 TRIM49BA6NDI0 452 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 HHLA1C9JL84 531 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 SLC9A3R1O14745 358 aaPredicted RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 SMC2O95347 1197 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 RETP07949 1114 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 ZDHHC11BP0C7U3 371 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 CCDC192P0DO97 292 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 TRIM21P19474 475 aaKnown RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 MXI1P50539 228 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 PMS1P54277 932 aaKnown RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 INCA1Q0VD86 236 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 MESP2Q0VG99 397 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 DMC1Q14565 340 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 CCDC6Q16204 474 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 GAB4Q2WGN9 574 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 EDRF1Q3B7T1 1238 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 FBXO43Q4G163 708 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 DCAF17Q5H9S7 520 aaPredicted RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 LY6G5CQ5SRR4 150 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 EMC10Q5UCC4 262 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 SNX30Q5VWJ9 437 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 LAIR1Q6GTX8 287 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 CLEC20AQ6ZU45 233 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 C12orf40Q86WS4 652 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 TTC30AQ86WT1 665 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 CCDC33Q8N5R6 958 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 GPR161Q8N6U8 529 aaKnown RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 ZFRQ96KR1 1074 aaKnown RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 GSDMAQ96QA5 445 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 PNKPQ96T60 521 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 TSG101Q99816 390 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 NIF3L1Q9GZT8 377 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 NMUR1Q9HB89 426 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 ZDHHC4Q9NPG8 344 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 TLR8Q9NR97 1041 aaKnown RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 OSER1Q9NX31 292 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 INVSQ9Y283 1065 aa10.14□□□□□ -0.79
MSH5-218ENST00000494646 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.14□□□□□ -0.79
MSH5-218ENST00000494646 A0A1W2PQH9 124 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 E2F8A0AVK6 867 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 FAM92AA1XBS5 289 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 DCLK1O15075 740 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 MDM4O15151 490 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CYP26A1O43174 497 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 TLR5O60602 858 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CILPO75339 1184 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 RPP40O75818 363 aaKnown RBP10.13□□□□□ -0.79
MSH5-218ENST00000494646 ADH5P11766 374 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 RARGP13631 454 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 HOXA6P31267 233 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 GTF2H1P32780 548 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 TIE1P35590 1138 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 ATP5C1P36542 298 aaKnown RBP10.13□□□□□ -0.79
MSH5-218ENST00000494646 DGKEP52429 567 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 ATXN1P54253 815 aaKnown RBP10.13□□□□□ -0.79
MSH5-218ENST00000494646 FKBP3Q00688 224 aaKnown RBP10.13□□□□□ -0.79
MSH5-218ENST00000494646 ENPEPQ07075 957 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 LRMPQ12912 555 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 PUM1Q14671 1186 aaKnown RBP eCLIP10.13□□□□□ -0.79
MSH5-218ENST00000494646 ANO4Q32M45 955 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CBWD6Q4V339 395 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CBWD3Q5JTY5 395 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CBWD5Q5RIA9 395 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 DGLUCYQ7Z3D6 616 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 KBTBD6Q86V97 674 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 DDX42Q86XP3 938 aaKnown RBP eCLIP10.13□□□□□ -0.79
MSH5-218ENST00000494646 TMEM25Q86YD3 366 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 BBS7Q8IWZ6 715 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CAMKK1Q8N5S9 505 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 FBXL13Q8NEE6 735 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 GAB3Q8WWW8 586 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 TMEM176AQ96HP8 235 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 ARID3AQ99856 593 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 DUSP16Q9BY84 665 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 ARRDC1-AS1Q9H2J1 176 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 FBXO44Q9H4M3 255 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CISHQ9NSE2 258 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 SEMA4GQ9NTN9 838 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 TBC1D14Q9P2M4 693 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 CEP192Q8TEP8 1941 aa10.13□□□□□ -0.79
MSH5-218ENST00000494646 NUP205Q92621 2012 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 TRIM24O15164 1050 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 GDF9O60383 454 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 STX10O60499 249 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 KAT7O95251 611 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 APODP05090 189 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 CD44P16070 742 aaKnown RBP10.12□□□□□ -0.79
MSH5-218ENST00000494646 KIF11P52732 1056 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 RAD23BP54727 409 aa10.12□□□□□ -0.79
MSH5-218ENST00000494646 MCCD1P59942 119 aaPredicted RBP10.12□□□□□ -0.79
MSH5-218ENST00000494646 GAD2Q05329 585 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms