RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 COCHO43405 550 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 SRFP11831 508 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 RARGP13631 454 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 PSMC3P17980 439 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 YWHAGP61981 247 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 SLC7A9P82251 487 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 CDR2Q01850 454 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 PDCLQ13371 301 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 VITQ6UXI7 678 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 MFSD6LQ8IWD5 586 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 C1orf131Q8NDD1 294 aaKnown RBP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 TTC16Q8NEE8 873 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 IRGQQ8WZA9 623 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 DDX1Q92499 740 aaKnown RBP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 BAP1Q92560 729 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 GOLGA1Q92805 767 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 SLC4A5Q9BY07 1137 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 PLA2G2FQ9BZM2 168 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 CCSER2Q9H7U1 834 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 NMUR1Q9HB89 426 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 THG1LQ9NWX6 298 aaKnown RBP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 CLIC5Q9NZA1 410 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 NOCTQ9UK39 431 aaKnown RBP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 ARHGAP26Q9UNA1 814 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 DUSP12Q9UNI6 340 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 HELZP42694 1942 aaKnown RBP13.1□□□□□ -0.31
TRA2A-209ENST00000494255 LRRC53A6NM62 1247 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 E5RJQ4 531 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 OLFM2O95897 454 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 MMEP08473 750 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 ATP5C1P36542 298 aaKnown RBP13.09□□□□□ -0.31
TRA2A-209ENST00000494255 RPL34P49207 117 aaKnown RBP13.09□□□□□ -0.31
TRA2A-209ENST00000494255 PGFP49763 221 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 DAOAP59103 153 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 ZXDAP98168 799 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 GRM2Q14416 872 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 ASIC2Q16515 512 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 C10orf120Q5SQS8 335 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 BTBD8Q5XKL5 378 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 CC2D1AQ6P1N0 951 aaPredicted RBP13.09□□□□□ -0.31
TRA2A-209ENST00000494255 TRIM72Q6ZMU5 477 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
TRA2A-209ENST00000494255 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.311e-7■□□□□ 8.5
TRA2A-209ENST00000494255 MSANTD4Q8NCY6 345 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 SH3RF2Q8TEC5 729 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
TRA2A-209ENST00000494255 SLC20A1Q8WUM9 679 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 PPP1R13BQ96KQ4 1090 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 TRIM5Q9C035 493 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 MIS12Q9H081 205 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 RNF38Q9H0F5 515 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 NUCKS1Q9H1E3 243 aaKnown RBP13.09□□□□□ -0.31
TRA2A-209ENST00000494255 SYNCQ9H7C4 482 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 BRD9Q9H8M2 597 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRA2A-209ENST00000494255 OSER1Q9NX31 292 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 CYTH4Q9UIA0 394 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 CPQQ9Y646 472 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 ITIH6Q6UXX5 1313 aa13.09□□□□□ -0.31
TRA2A-209ENST00000494255 A0A1W2PQJ5 194 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 DLL1O00548 723 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 ZNF263O14978 683 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 GABBR2O75899 941 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 TPM1P09493 284 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 GDI1P31150 447 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 CDH5P33151 784 aaPredicted RBP13.08□□□□□ -0.31
TRA2A-209ENST00000494255 PFKPQ01813 784 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 USP4Q13107 963 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 ARHGAP29Q52LW3 1261 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 SARM1Q6SZW1 724 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 TMEM110Q86TL2 294 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 GAS2L3Q86XJ1 694 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 ZNF276Q8N554 614 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 WDTC1Q8N5D0 677 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 CPLX3Q8WVH0 158 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.31
TRA2A-209ENST00000494255 EDAQ92838 391 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 KHSRPQ92945 711 aaKnown RBP eCLIP13.08□□□□□ -0.317e-7■■■■□ 22.3
TRA2A-209ENST00000494255 RSPRY1Q96DX4 576 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 TRIM62Q9BVG3 475 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 TTYH3Q9C0H2 523 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.31
TRA2A-209ENST00000494255 SEPT11Q9NVA2 429 aaKnown RBP13.08□□□□□ -0.31
TRA2A-209ENST00000494255 SMPD4Q9NXE4 827 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 DNMT3LQ9UJW3 386 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 FBXL21Q9UKT6 434 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 CCL26Q9Y258 94 aa13.08□□□□□ -0.31
TRA2A-209ENST00000494255 SPTBN5Q9NRC6 3674 aaKnown RBP13.08□□□□□ -0.32
TRA2A-209ENST00000494255 NARSO43776 548 aaKnown RBP13.08□□□□□ -0.32
TRA2A-209ENST00000494255 LTFP02788 710 aa13.08□□□□□ -0.32
TRA2A-209ENST00000494255 TCF3P15923 654 aa13.08□□□□□ -0.32
TRA2A-209ENST00000494255 GPC5P78333 572 aa13.08□□□□□ -0.32
TRA2A-209ENST00000494255 FMO1Q01740 532 aa13.08□□□□□ -0.32
TRA2A-209ENST00000494255 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms