RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 FAM200BP0CF97 657 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 EPB41P11171 864 aaKnown RBP9.03□□□□□ -0.96
LRCH3-219ENST00000494069 PFKLP17858 780 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 DRD1P21728 446 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 BMP6P22004 513 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 ID4P47928 161 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 MXI1P50539 228 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 SEC13P55735 322 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 ENPEPQ07075 957 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
LRCH3-219ENST00000494069 PPP2R5DQ14738 602 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 DHCR24Q15392 516 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 DCAF17Q5H9S7 520 aaPredicted RBP9.03□□□□□ -0.96
LRCH3-219ENST00000494069 HECTD3Q5T447 861 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 PPP1R26Q5T8A7 1209 aaPredicted RBP9.03□□□□□ -0.96
LRCH3-219ENST00000494069 SNX30Q5VWJ9 437 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 KRT39Q6A163 491 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 RHBDF2Q6PJF5 856 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 CLEC20AQ6ZU45 233 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 LONP2Q86WA8 852 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 ZC3H3Q8IXZ2 948 aaKnown RBP9.03□□□□□ -0.96
LRCH3-219ENST00000494069 RPLP0P6Q8NHW5 317 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 SMARCE1Q969G3 411 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 CYFIP2Q96F07 1278 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 HHIPQ96QV1 700 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 HNRNPABQ99729 332 aaKnown RBP9.03□□□□□ -0.96
LRCH3-219ENST00000494069 NT5C1AQ9BXI3 368 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 CYP3A43Q9HB55 503 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 NMUR1Q9HB89 426 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 RMND1Q9NWS8 449 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 RAB20Q9NX57 234 aa9.03□□□□□ -0.96
LRCH3-219ENST00000494069 HELZP42694 1942 aaKnown RBP9.02□□□□□ -0.97
LRCH3-219ENST00000494069 MYOFQ9NZM1 2061 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 K7EQS6 105 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 MDM4O15151 490 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 GREM1O60565 184 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 TLR5O60602 858 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 SMC2O95347 1197 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 IRF1P10914 325 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 ACO1P21399 889 aaKnown RBP9.02□□□□□ -0.97
LRCH3-219ENST00000494069 HOXA6P31267 233 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 GTF2H1P32780 548 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 PDE6CP51160 858 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 FKBP3Q00688 224 aaKnown RBP9.02□□□□□ -0.97
LRCH3-219ENST00000494069 AMPD2Q01433 879 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 SPEM2Q0P670 501 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 LRMPQ12912 555 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 COBLL1Q53SF7 1204 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 LY6G5CQ5SRR4 150 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 EMC10Q5UCC4 262 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 TCERG1LQ5VWI1 586 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 SCD5Q86SK9 330 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 WDR5BQ86VZ2 330 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 BBS7Q8IWZ6 715 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 SLC4A11Q8NBS3 891 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 PDZD8Q8NEN9 1154 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 OVCA2Q8WZ82 227 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 CCDC34Q96HJ3 373 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 TIGD1Q96MW7 591 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 IMPG2Q9BZV3 1241 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 ZDHHC4Q9NPG8 344 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 CISHQ9NSE2 258 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 SLC8A2Q9UPR5 921 aa9.02□□□□□ -0.97
LRCH3-219ENST00000494069 SDK1Q7Z5N4 2213 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 A0A1W2PQH9 124 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 E2F8A0AVK6 867 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 PPP1R3GB7ZBB8 358 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 BIN1O00499 593 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 TRIM24O15164 1050 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 SLC16A3O15427 465 aaKnown RBP9.01□□□□□ -0.97
LRCH3-219ENST00000494069 HNRNPLP14866 589 aaKnown RBP eCLIP9.01□□□□□ -0.97
LRCH3-219ENST00000494069 RAD23BP54727 409 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 DNAH14Q0VDD8 3507 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 NR1H3Q13133 447 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 DMC1Q14565 340 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 CCDC6Q16204 474 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 FBXO43Q4G163 708 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 C2orf27AQ580R0 203 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 KLHL10Q6JEL2 608 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 TMEM25Q86YD3 366 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 CCDC33Q8N5R6 958 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 FAM160A2Q8N612 972 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-219ENST00000494069 NAT16Q8N8M0 369 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 FBXL13Q8NEE6 735 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 USP33Q8TEY7 942 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 NDRG1Q92597 394 aaKnown RBP9.01□□□□□ -0.97
LRCH3-219ENST00000494069 SLC35C1Q96A29 364 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 P2RY11Q96G91 374 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 TMEM176AQ96HP8 235 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 HEXIM2Q96MH2 286 aaKnown RBP9.01□□□□□ -0.97
LRCH3-219ENST00000494069 TSG101Q99816 390 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 DUSP9Q99956 384 aaKnown RBP9.01□□□□□ -0.97
LRCH3-219ENST00000494069 KLF16Q9BXK1 252 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-219ENST00000494069 DUSP16Q9BY84 665 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 COMMD8Q9NX08 183 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 RAB23Q9ULC3 237 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 USP18Q9UMW8 372 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 SCML2Q9UQR0 700 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 SH3BP1Q9Y3L3 701 aa9.01□□□□□ -0.97
LRCH3-219ENST00000494069 TULP2O00295 520 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms