RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 DESP17661 470 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 HOXD10P28358 340 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SULT1E1P49888 294 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 ATP1A2P50993 1020 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 ATXN1P54253 815 aaKnown RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 EIF3EP60228 445 aaKnown RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 GPS1Q13098 491 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 KRT81Q14533 505 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SLC29A2Q14542 456 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 MBTPS1Q14703 1052 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 PDK2Q15119 407 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 DPYSL2Q16555 572 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 UPP1Q16831 310 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 TIGD5Q53EQ6 642 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SLC9A4Q6AI14 798 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 CD300LGQ6UXG3 332 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 NPNTQ6UXI9 565 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 DSTYKQ6XUX3 929 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 STRADAQ7RTN6 431 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 BNIPLQ7Z465 357 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 RELL1Q8IUW5 271 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SCUBE3Q8IX30 993 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 PQLC3Q8N755 202 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 PLD5Q8N7P1 536 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SLC43A3Q8NBI5 491 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 RNF169Q8NCN4 708 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 ZMIZ2Q8NF64 920 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 UHMK1Q8TAS1 419 aaKnown RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 RAET1EQ8TD07 263 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 PXYLP1Q8TE99 480 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 KCTD13Q8WZ19 329 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 PRCCQ92733 491 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 PKNOX2Q96KN3 472 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 RNF157Q96PX1 679 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 KCTD15Q96SI1 283 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 ADAM2Q99965 735 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 TMEM30AQ9NV96 361 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 WBP1LQ9NX94 342 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SAE1Q9UBE0 346 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 CDH9Q9ULB4 789 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 AP4E1Q9UPM8 1137 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
CLCN6-208ENST00000494028 PTCH2Q9Y6C5 1203 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 SCN5AQ14524 2016 aa11.12□□□□□ -0.63
CLCN6-208ENST00000494028 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 DCDC2CA8MYV0 355 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 APOL1O14791 398 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 EIF3HO15372 352 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN6-208ENST00000494028 B4GALT3O60512 393 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 CYP11A1P05108 521 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 ABHD2P08910 425 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 CKBP12277 381 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 SKIP12755 728 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 TGM2P21980 687 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 ACTN2P35609 894 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 BRCC3P46736 316 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 LHX1P48742 406 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 CACNA2D1P54289 1103 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 GNGT1P63211 74 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 PITX1P78337 314 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-208ENST00000494028 ROR1Q01973 937 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 TUSC3Q13454 348 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 TFDP2Q14188 446 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 MORF4L2Q15014 288 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 EFHC1Q5JVL4 640 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 LHX8Q68G74 356 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 SCYL2Q6P3W7 929 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 BHLHA9Q7RTU4 235 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 GPRIN1Q7Z2K8 1008 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 DEFB106AQ8N104 65 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 CCDC185Q8N715 623 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 PCDH19Q8TAB3 1148 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 MYLPFQ96A32 169 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 PGM2Q96G03 612 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 PCED1BQ96HM7 432 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 GLT1D1Q96MS3 346 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 UROC1Q96N76 676 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 SLC2A13Q96QE2 648 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 PKMYT1Q99640 499 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 SMOQ99835 787 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 TSEN34Q9BSV6 310 aaKnown RBP11.11□□□□□ -0.63
CLCN6-208ENST00000494028 MED10Q9BTT4 135 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 CAPS2Q9BXY5 557 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 PHACTR1Q9C0D0 580 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 TSPYL1Q9H0U9 437 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 C10orf88Q9H8K7 445 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN6-208ENST00000494028 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 INPP5FQ9Y2H2 1132 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 TIMM13Q9Y5L4 95 aaPredicted RBP11.11□□□□□ -0.63
CLCN6-208ENST00000494028 USP3Q9Y6I4 520 aa11.11□□□□□ -0.63
CLCN6-208ENST00000494028 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.1□□□□□ -0.63
CLCN6-208ENST00000494028 MYBPHLA2RUH7 354 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms