RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	GFPT2	O94808	682 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	FBXO21	O94952	628 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	LSM8	O95777	96 aa	Known RBP	10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	CALCA	P01258	141 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	RALA	P11233	206 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	ATP5C1	P36542	298 aa	Known RBP	10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	PLA2G5	P39877	138 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	GPD2	P43304	727 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	RGS7	P49802	495 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	SLC7A9	P82251	487 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	PLCB2	Q00722	1185 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	GOLGA8F	Q08AF8	430 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	GOLGA8DP	Q0D2H9	430 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	GRM2	Q14416	872 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	ARHGAP29	Q52LW3	1261 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	PM20D1	Q6GTS8	502 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	PMF1	Q6P1K2	205 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	DENND1B	Q6P3S1	775 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	KLHDC10	Q6PID8	442 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	TRIM67	Q6ZTA4	783 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	ZNF677	Q86XU0	584 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	KIAA1958	Q8N8K9	716 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	RNF214	Q8ND24	703 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	EPS8L1	Q8TE68	723 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	IRGQ	Q8WZA9	623 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	CYP2S1	Q96SQ9	504 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	RPP25	Q9BUL9	199 aa	Known RBP	10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	TRIM62	Q9BVG3	475 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	NUP58	Q9BVL2	599 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	C1QTNF1	Q9BXJ1	281 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	ULBP1	Q9BZM6	244 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	EDEM3	Q9BZQ6	932 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	LHX5	Q9H2C1	402 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	BRD9	Q9H8M2	597 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	ST7	Q9NRC1	585 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012	FBXL21	Q9UKT6	434 aa		10.5	□□□□□ -0.73
MACF1-222	ENST00000494012		A0A1W2PQH9	124 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	CHAD	O15335	359 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	COCH	O43405	550 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	NARS	O43776	548 aa	Known RBP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	CFH	P08603	1231 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	MBL2	P11226	248 aa	Predicted RBP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	LCP1	P13796	627 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	TCF3	P15923	654 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	FER	P16591	822 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	GDI1	P31150	447 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	RPL34	P49207	117 aa	Known RBP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	YWHAG	P61981	247 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	GPC5	P78333	572 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	USP4	Q13107	963 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	PDCL	Q13371	301 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	FIGN	Q5HY92	759 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	RSRC2	Q7L4I2	434 aa	Known RBP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	PASD1	Q8IV76	773 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	ZNF276	Q8N554	614 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	TMEM35B	Q8NCS4	154 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	MSANTD4	Q8NCY6	345 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	IPO4	Q8TEX9	1081 aa	Known RBP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	RSPRY1	Q96DX4	576 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	SLC22A12	Q96S37	553 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	SLC4A5	Q9BY07	1137 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	PLA2G2F	Q9BZM2	168 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	SMOC2	Q9H3U7	446 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	SYNC	Q9H7C4	482 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	CCSER2	Q9H7U1	834 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	TRPV5	Q9NQA5	729 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	OLA1	Q9NTK5	396 aa	Known RBP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	IFNK	Q9P0W0	207 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	WNT16	Q9UBV4	365 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	CCL26	Q9Y258	94 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	CPQ	Q9Y646	472 aa		10.49	□□□□□ -0.73
MACF1-222	ENST00000494012	LEFTY2	O00292	366 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	RARG	P13631	454 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	DAOA	P59103	153 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	CDR2	Q01850	454 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	MTF1	Q14872	753 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	PDGFRL	Q15198	375 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	ZNF77	Q15935	545 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	C10orf120	Q5SQS8	335 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	BTBD8	Q5XKL5	378 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	TRIM72	Q6ZMU5	477 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	SCD5	Q86SK9	330 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	TMEM110	Q86TL2	294 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	NOP9	Q86U38	636 aa	Known RBP	10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	GPIHBP1	Q8IV16	184 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	C1orf131	Q8NDD1	294 aa	Known RBP	10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	TTC16	Q8NEE8	873 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	ZNF397	Q8NF99	534 aa	Predicted RBP	10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	CSGALNACT1	Q8TDX6	532 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	SH3RF2	Q8TEC5	729 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	RNF139	Q8WU17	664 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	SHD	Q96IW2	340 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	PPP1R13B	Q96KQ4	1090 aa		10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	XPO4	Q9C0E2	1151 aa	Known RBP	10.48	□□□□□ -0.73
MACF1-222	ENST00000494012	MIS12	Q9H081	205 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms