RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PIGZQ86VD9 579 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 CREBRFQ8IUR6 639 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 KREMEN1Q96MU8 473 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 LINC00597Q9H2U6 94 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 PRMT8Q9NR22 394 aaPredicted RBP23.84■■□□□ 1.41
SNIP1-203ENST00000493916 OSER1Q9NX31 292 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 HESX1Q9UBX0 185 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 CNTN6Q9UQ52 1028 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 MYO15AQ9UKN7 3530 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 A0A1W2PQH9 124 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 E2F8A0AVK6 867 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 SP9P0CG40 484 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 GJA4P35212 333 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 MTIF2P46199 727 aaKnown RBP23.83■■□□□ 1.41
SNIP1-203ENST00000493916 ZNF528Q3MIS6 628 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 TMEM196Q5HYL7 178 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 KLHDC10Q6PID8 442 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 TRIM65Q6PJ69 517 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 LCLAT1Q6UWP7 414 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 ENOSF1Q7L5Y1 443 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 SYNPOQ8N3V7 929 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 ZNF276Q8N554 614 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 RBBP8NLQ8NC74 664 aaPredicted RBP23.83■■□□□ 1.41
SNIP1-203ENST00000493916 NACA2Q9H009 215 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 NMUR1Q9HB89 426 aa23.83■■□□□ 1.41
SNIP1-203ENST00000493916 VPS13AQ96RL7 3174 aa23.83■■□□□ 1.4
SNIP1-203ENST00000493916 RNF225M0QZC1 329 aaPredicted RBP23.82■■□□□ 1.4
SNIP1-203ENST00000493916 MBD3O95983 291 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 SETSIPP0DME0 302 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 PDE4CQ08493 712 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 NR1H3Q13133 447 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 STILQ15468 1287 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 MAN2A1Q16706 1144 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 PKDCCQ504Y2 493 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 GBP6Q6ZN66 633 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 SCD5Q86SK9 330 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 TFAP2BQ92481 460 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 EXOC4Q96A65 974 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 FAM81BQ96LP2 452 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.82■■□□□ 1.4
SNIP1-203ENST00000493916 CLIC5Q9NZA1 410 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 TBC1D14Q9P2M4 693 aa23.82■■□□□ 1.4
SNIP1-203ENST00000493916 ATP5C1P36542 298 aaKnown RBP23.81■■□□□ 1.4
SNIP1-203ENST00000493916 PLA2G4AP47712 749 aa23.81■■□□□ 1.4
SNIP1-203ENST00000493916 GRSF1Q12849 480 aaKnown RBP eCLIP23.81■■□□□ 1.4
SNIP1-203ENST00000493916 TADA2BQ86TJ2 420 aa23.81■■□□□ 1.4
SNIP1-203ENST00000493916 ARHGAP18Q8N392 663 aa23.81■■□□□ 1.4
SNIP1-203ENST00000493916 OTUB2Q96DC9 234 aa23.81■■□□□ 1.4
SNIP1-203ENST00000493916 CDK5RAP1Q96SZ6 601 aaKnown RBP23.81■■□□□ 1.4
SNIP1-203ENST00000493916 CRACR2AQ9BSW2 395 aa23.81■■□□□ 1.4
SNIP1-203ENST00000493916 UBE2TQ9NPD8 197 aaPredicted RBP23.81■■□□□ 1.4
SNIP1-203ENST00000493916 RBM12Q9NTZ6 932 aaKnown RBP23.81■■□□□ 1.4
SNIP1-203ENST00000493916 NAGPAQ9UK23 515 aa23.81■■□□□ 1.4
SNIP1-203ENST00000493916 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.81■■□□□ 1.4
SNIP1-203ENST00000493916 DMDP11532 3685 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 TULP2O00295 520 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 TBX18O95935 607 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 CYP17A1P05093 508 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 RARGP13631 454 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 MRE11P49959 708 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 GAS6Q14393 721 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 CNGA2Q16280 664 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 EXOC3L4Q17RC7 722 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 SMYD5Q6GMV2 418 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 PM20D1Q6GTS8 502 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 FSTL4Q6MZW2 842 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 ADGRG2Q8IZP9 1017 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 SPEM1Q8N4L4 309 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 KCTD13Q8WZ19 329 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 P2RY13Q9BPV8 354 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 ZSWIM1Q9BR11 485 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 KLF16Q9BXK1 252 aaPredicted RBP23.8■■□□□ 1.4
SNIP1-203ENST00000493916 APEX2Q9UBZ4 518 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 SH3BP1Q9Y3L3 701 aa23.8■■□□□ 1.4
SNIP1-203ENST00000493916 USP34Q70CQ2 3546 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 RALAP11233 206 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 CCR3P51677 355 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 TKTL1P51854 596 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 MFAP3P55082 362 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 Q6ZS52 159 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 UBA3Q8TBC4 463 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 ENOX1Q8TC92 643 aaKnown RBP23.79■■□□□ 1.4
SNIP1-203ENST00000493916 DNMT3LQ9UJW3 386 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 PIEZO1Q92508 2521 aa23.79■■□□□ 1.4
SNIP1-203ENST00000493916 ZBED1O96006 694 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 SLC9A1P19634 815 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 DRD1P21728 446 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 BRD2P25440 801 aaKnown RBP23.78■■□□□ 1.4
SNIP1-203ENST00000493916 PON1P27169 355 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 GALK1P51570 392 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 CSTF1Q05048 431 aaKnown RBP23.78■■□□□ 1.4
SNIP1-203ENST00000493916 GOLGA8FQ08AF8 430 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 GOLGA8DPQ0D2H9 430 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 DHCR24Q15392 516 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 GAB4Q2WGN9 574 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 VWA3BQ502W6 1294 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 MIIPQ5JXC2 388 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 C10orf120Q5SQS8 335 aa23.78■■□□□ 1.4
SNIP1-203ENST00000493916 ZC3H14Q6PJT7 736 aaKnown RBP23.78■■□□□ 1.4
SNIP1-203ENST00000493916 ALYREFQ86V81 257 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms