RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PBLDP30039 288 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 HK2P52789 917 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 RCAN1P53805 252 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 NRG3P56975 720 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 PPIDQ08752 370 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 GRM4Q14833 912 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SCAIQ8N9R8 606 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 UCMAQ8WVF2 138 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 C1orf50Q9BV19 199 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 NT5C1AQ9BXI3 368 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ELOVL6Q9H5J4 265 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SLC35C2Q9NQQ7 365 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF222Q9UK12 451 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 LOC102724428A0A0B4J2F2 783 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 H3BN98 237 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 PRODHO43272 600 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 RNASEH1O60930 286 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 TNFAIP8O95379 198 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 FDX1P10109 184 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 UMPSP11172 480 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ITGALP20701 1170 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 HALP42357 657 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 GSTM5P46439 218 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CACNA2D1P54289 1103 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SIK1P57059 783 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 OLFML1Q6UWY5 402 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 LRRC34Q8IZ02 419 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 TDRD5Q8NAT2 981 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 KCNB2Q92953 911 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ZIM3Q96PE6 472 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CLPBQ9H078 707 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SEC31BQ9NQW1 1179 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 VTI1BQ9UEU0 232 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SSU72P8A0A1W2PR75 194 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CD3EAPO15446 510 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 KCNQ3O43525 872 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 IDH3BO43837 385 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CST8O60676 142 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SLC11A2P49281 568 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 USP11P51784 963 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 IL2P60568 153 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 GPSM2P81274 684 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 KCNB1Q14721 858 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF846Q147U1 533 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 DCAF6Q58WW2 860 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF677Q86XU0 584 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CLVS1Q8IUQ0 354 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SLC22A9Q8IVM8 553 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SIX5Q8N196 739 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SH3RF3Q8TEJ3 882 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF483Q8TF39 744 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 TMEM47Q9BQJ4 181 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 UGT2B28Q9BY64 529 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 RIBC2Q9H4K1 309 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 PIH1D3Q9NQM4 214 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 MYOM2P54296 1465 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC162PA2VCL2 907 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 HS6ST1O60243 411 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 LARGE1O95461 756 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 PDGFRBP09619 1106 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ITGA4P13612 1032 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 UQCRBP14927 111 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 CNTFP26441 200 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 CCNG1P51959 295 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ADARP55265 1226 aaKnown RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 GRAPQ13588 217 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 QPRTQ15274 297 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NEDD8Q15843 81 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ERMARDQ5T6L9 678 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 RASSF6Q6ZTQ3 369 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 GRAPLQ8TC17 118 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ERP44Q9BS26 406 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 POLD4Q9HCU8 107 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 RBM12Q9NTZ6 932 aaKnown RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 MYRFQ9Y2G1 1151 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 PLEKHG1Q9ULL1 1385 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 PLB1Q6P1J6 1458 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 TEX14Q8IWB6 1497 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 RAD51BO15315 384 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 KHDRBS3O75525 346 aaKnown RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NUDT14O95848 222 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 HLA-DQA2P01906 255 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 COILP38432 576 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 TMEM132BQ14DG7 1078 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NAB2Q15742 525 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 KCTD21Q4G0X4 260 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 FGD3Q5JSP0 725 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 PCNX4Q63HM2 1172 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ULK2Q8IYT8 1036 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 FMR1NBQ8N0W7 255 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 NSMCE2Q96MF7 247 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 SLITRK1Q96PX8 696 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 WRNIP1Q96S55 665 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 CHID1Q9BWS9 393 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-221ENST00000493795 ENTPD7Q9NQZ7 604 aa8.09□□□□□ -1.11
BRCA1-221ENST00000493795 METTL5Q9NRN9 209 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms