RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SPRY2O43597 315 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 MYL4P12829 197 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 HTR7P34969 479 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 GATMP50440 423 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
ITGB1-216ENST00000493758 DPY19L3Q6ZPD9 716 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 USP49Q70CQ1 688 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 BEND5Q7L4P6 421 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.15□□□□□ -1.59
ITGB1-216ENST00000493758 TERB1Q8NA31 727 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 CYP2W1Q8TAV3 490 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 DPCDQ9BVM2 203 aaPredicted RBP5.15□□□□□ -1.59
ITGB1-216ENST00000493758 ZBTB26Q9HCK0 441 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 ADARB2Q9NS39 739 aaKnown RBP5.15□□□□□ -1.59
ITGB1-216ENST00000493758 STEAP1Q9UHE8 339 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 PCSK5Q92824 1860 aa5.15□□□□□ -1.59
ITGB1-216ENST00000493758 OR2W5A6NFC9 320 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 MANSC4A6NHS7 340 aaPredicted RBP5.14□□□□□ -1.59
ITGB1-216ENST00000493758 AGPSO00116 658 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 KPNA5O15131 536 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 USP1O94782 785 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 MYL1P05976 194 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 HGFP14210 728 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 ZNF37AP17032 561 aaPredicted RBP5.14□□□□□ -1.59
ITGB1-216ENST00000493758 TUBA4AP68366 448 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 PSG6Q00889 435 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 BCDIN3DQ7Z5W3 292 aaKnown RBP5.14□□□□□ -1.59
ITGB1-216ENST00000493758 BRI3BPQ8WY22 251 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 RITA1Q96K30 269 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 FYTTD1Q96QD9 318 aaKnown RBP5.14□□□□□ -1.59
ITGB1-216ENST00000493758 WDR24Q96S15 920 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 GDF15Q99988 308 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 MACROD1Q9BQ69 325 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 NAA15Q9BXJ9 866 aaKnown RBP5.14□□□□□ -1.59
ITGB1-216ENST00000493758 RXFP3Q9NSD7 469 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 SH3BP4Q9P0V3 963 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 HPSEQ9Y251 543 aa5.14□□□□□ -1.59
ITGB1-216ENST00000493758 POC1B-GALNT4F8VUJ3 575 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 EXOC5O00471 708 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 CBFA2T3O75081 653 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 KRT18P05783 430 aaKnown RBP5.13□□□□□ -1.59
ITGB1-216ENST00000493758 CELA2AP08217 269 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 FPR3P25089 353 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 MST1P26927 711 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 CERS1P27544 350 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 STT3AP46977 705 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 DIO1P49895 249 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 RENBPP51606 427 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 LMAN2Q12907 356 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 MRNIPQ6NTE8 343 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 GALNT4Q8N4A0 578 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 MMS19Q96T76 1030 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 CIPCQ9C0C6 399 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 ASIC5Q9NY37 505 aa5.13□□□□□ -1.59
ITGB1-216ENST00000493758 NKX1-2Q9UD57 310 aaPredicted RBP5.13□□□□□ -1.59
ITGB1-216ENST00000493758 TCRBV5S1A1TA0A578 114 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 UBE2Q2LH0YL09 131 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 H3BNC9 293 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 AP4M1O00189 453 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 HMGB1P09429 215 aaKnown RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 NHLRC4P0CG21 123 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 APEHP13798 732 aaKnown RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 ALDH5A1P51649 535 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 STK3Q13188 491 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 KCNAB1Q14722 419 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 SLC5A9Q2M3M2 681 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 L1TD1Q5T7N2 865 aaKnown RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 PRAMEF17Q5VTA0 474 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 NAPRTQ6XQN6 538 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 ZNF782Q6ZMW2 699 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 OR2C3Q8N628 320 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 METTL25Q8N6Q8 603 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 PNPLA1Q8N8W4 532 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 NGDNQ8NEJ9 315 aaKnown RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 ZNF398Q8TD17 642 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 HIST1H2AAQ96QV6 131 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 MAGEB5Q9BZ81 275 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 SLC25A32Q9H2D1 315 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 TMEM8AQ9HCN3 771 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 CCNL1Q9UK58 526 aaPredicted RBP5.12□□□□□ -1.59
ITGB1-216ENST00000493758 FAM50BQ9Y247 325 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 SLC27A6Q9Y2P4 619 aa5.12□□□□□ -1.59
ITGB1-216ENST00000493758 PRRT4C9JH25 899 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 INO80B-WBP1J3KQ70 363 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 APOL1O14791 398 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 SNX2O60749 519 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 FGF18O76093 207 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ARP10275 920 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ADRA1DP25100 572 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 GABRB3P28472 473 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 MCM5P33992 734 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ITGA8P53708 1063 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 SSBP2P81877 361 aaPredicted RBP5.11□□□□□ -1.59
ITGB1-216ENST00000493758 LARS2Q15031 903 aaKnown RBP5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ACOX1Q15067 660 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ABLIM2Q6H8Q1 611 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 ZNF66Q6ZN08 573 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 KIAA0408Q6ZU52 694 aa5.11□□□□□ -1.59
ITGB1-216ENST00000493758 CCAR1Q8IX12 1150 aaKnown RBP5.11□□□□□ -1.59
ITGB1-216ENST00000493758 C8orf58Q8NAV2 365 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms