RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 CYP27A1Q02318 531 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 SDE2Q6IQ49 451 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 KRI1Q8N9T8 703 aaKnown RBP15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 DNASE2BQ8WZ79 361 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 UBL7Q96S82 380 aaPredicted RBP15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 MTMR12Q9C0I1 747 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 SPHK2Q9NRA0 654 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 TOR4AQ9NXH8 423 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 SEL1LQ9UBV2 794 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 MYH10P35580 1976 aa15.16■□□□□ 0.02
PRPF40A-211ENST00000493468 TK2O00142 265 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 CER1O95813 267 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 ABL1P00519 1130 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 TUBP50607 506 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 L1TD1Q5T7N2 865 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 SNX30Q5VWJ9 437 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 EGFLAMQ63HQ2 1017 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 DBX2Q6ZNG2 339 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 METTL3Q86U44 580 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 SFR1Q86XK3 245 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 CHPFQ8IZ52 775 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 GALNT15Q8N3T1 639 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 NAT16Q8N8M0 369 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 ZSWIM2Q8NEG5 633 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 SAAL1Q96ER3 474 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 HPDLQ96IR7 371 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 ACCSQ96QU6 501 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 CDC6Q99741 560 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 R3HCC1Q9Y3T6 440 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 PCDHGB2Q9Y5G2 931 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 CABIN1Q9Y6J0 2220 aa15.15■□□□□ 0.02
PRPF40A-211ENST00000493468 GFRA2O00451 464 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 COCHO43405 550 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 CACNG3O60359 315 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 RTN3O95197 1032 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 ZIC2O95409 532 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 WASP42768 502 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 C19orf57Q0VDD7 668 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 GRAMD4Q6IC98 578 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 IL27RAQ6UWB1 636 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 BBS7Q8IWZ6 715 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 CADM4Q8NFZ8 388 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 ANKRD36BP1Q96IX9 119 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 FAM84AQ96KN4 292 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 MRGPRX1Q96LB2 322 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 PDE11AQ9HCR9 933 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 INTS13Q9NVM9 706 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 SH3BP1Q9Y3L3 701 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 KIF3AQ9Y496 699 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 MAST4O15021 2626 aa15.14■□□□□ 0.01
PRPF40A-211ENST00000493468 E9PAM4 449 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 FLRT2O43155 660 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 FAM163BP0C2L3 166 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 GAP43P17677 238 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 YWHAQP27348 245 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 CD6P30203 668 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 LONP1P36776 959 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 KCNA1Q09470 495 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 CAMK2BQ13554 666 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 ANO4Q32M45 955 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 MDH1BQ5I0G3 518 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 HECTD3Q5T447 861 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 MCTP1Q6DN14 999 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 TMEM25Q86YD3 366 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 NUP93Q8N1F7 819 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 RASSF8Q8NHQ8 419 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 SETD7Q8WTS6 366 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 ACOX2Q99424 681 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 MRPL44Q9H9J2 332 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 CD93Q9NPY3 652 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 TM7SF3Q9NS93 570 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 TMEM30AQ9NV96 361 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 MARK1Q9P0L2 795 aa15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 USP36Q9P275 1121 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-211ENST00000493468 CKAP5Q14008 2032 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 MEI4A8MW99 385 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 KIAA0391O15091 583 aaKnown RBP15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 TRIM24O15164 1050 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 CILPO75339 1184 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 TACC1O75410 805 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 PDGFRBP09619 1106 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 DDIT3P35638 169 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 MATKP42679 507 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 CACNA2D1P54289 1103 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 CYP4F3Q08477 520 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 ALCAMQ13740 583 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 SCFD1Q8WVM8 642 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 FBXO32Q969P5 355 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 XPO6Q96QU8 1125 aaKnown RBP15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 GAREM1Q9H706 876 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 OLFML3Q9NRN5 406 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 DNAJC17Q9NVM6 304 aaKnown RBP15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 WSB2Q9NYS7 404 aaPredicted RBP15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 TMEM131Q92545 1883 aa15.12■□□□□ 0.01
PRPF40A-211ENST00000493468 KNL1Q8NG31 2342 aa15.11■□□□□ 0.01
PRPF40A-211ENST00000493468 KNTC1P50748 2209 aa15.11■□□□□ 0.01
PRPF40A-211ENST00000493468 TRABD2BA6NFA1 517 aa15.11■□□□□ 0.01
PRPF40A-211ENST00000493468 BMP15O95972 392 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms