RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PCSK9Q8NBP7 692 aaKnown RBP4.03□□□□□ -1.76
PTCD3-218ENST00000493430 BRIX1Q8TDN6 353 aaKnown RBP4.03□□□□□ -1.76
PTCD3-218ENST00000493430 MOGAT1Q96PD6 335 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 FSD1LQ9BXM9 530 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 KRTAP1-5Q9BYS1 174 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 GLOD4Q9HC38 313 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 TUBA8Q9NY65 449 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-218ENST00000493430 ELOVL5Q9NYP7 299 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 CCNL1Q9UK58 526 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-218ENST00000493430 SSX2IPQ9Y2D8 614 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 RALGAPBQ86X10 1494 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 ATRNO75882 1429 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 SLIT2O94813 1529 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 SMIM35A0A1B0GVV1 85 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 A1L4Q6 167 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 H3BUI4 141 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 SNUPNO95149 360 aaKnown RBP4.02□□□□□ -1.77
PTCD3-218ENST00000493430 POU2F2P09086 479 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 HOXB6P17509 224 aaKnown RBP4.02□□□□□ -1.77
PTCD3-218ENST00000493430 PLCD1P51178 756 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 LILRA4P59901 499 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 EXOSC9Q06265 439 aaKnown RBP4.02□□□□□ -1.77
PTCD3-218ENST00000493430 E2F2Q14209 437 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 PXDC1Q5TGL8 231 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 EMC10Q5UCC4 262 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 RGS7BPQ6MZT1 257 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-218ENST00000493430 CNGA4Q8IV77 575 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 C8orf58Q8NAV2 365 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 CYP2W1Q8TAV3 490 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 XAGE5Q8WWM1 108 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 ATG4AQ8WYN0 398 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 GLG1Q92896 1179 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 DAZAP1Q96EP5 407 aaKnown RBP4.02□□□□□ -1.77
PTCD3-218ENST00000493430 HMCESQ96FZ2 354 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 C5orf34Q96MH7 638 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 TMEM79Q9BSE2 394 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 VPS16Q9H269 839 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 NCOA3Q9Y6Q9 1424 aa4.02□□□□□ -1.77
PTCD3-218ENST00000493430 DLG5Q8TDM6 1919 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 NHSQ6T4R5 1651 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 UNC5CO95185 931 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 SFPQP23246 707 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTCD3-218ENST00000493430 KCNJ5P48544 419 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 EVA1CP58658 441 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 GPSM2P81274 684 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 AMPD3Q01432 767 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 SATB1Q01826 763 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 PLS1Q14651 629 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 DAZAP2Q15038 168 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-218ENST00000493430 TRIP6Q15654 476 aaKnown RBP4.01□□□□□ -1.77
PTCD3-218ENST00000493430 PGS1Q32NB8 556 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 AWAT2Q6E213 333 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 MIS18BP1Q6P0N0 1132 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 MTHFD1LQ6UB35 978 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 Q6ZWC4 215 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 ABHD11Q8NFV4 315 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 R3HDM4Q96D70 268 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 MACROD1Q9BQ69 325 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 SPRTNQ9H040 489 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-218ENST00000493430 SHOC2Q9UQ13 582 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 PLEKHM1Q9Y4G2 1056 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 LY75O60449 1722 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 ABCC11Q96J66 1382 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 SBNO2Q9Y2G9 1366 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 CCDC88AQ3V6T2 1871 aa4.01□□□□□ -1.77
PTCD3-218ENST00000493430 SLIT3O75094 1523 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 NFAT5O94916 1531 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 WDR17Q8IZU2 1322 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 POC1B-GALNT4F8VUJ3 575 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 H7C1Q1 480 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 TRIM38O00635 465 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 TJP3O95049 919 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 GRPP07492 148 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 DLDP09622 509 aaKnown RBP4□□□□□ -1.77
PTCD3-218ENST00000493430 HDCP19113 662 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 ARHGAP25P42331 645 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 NR4A2P43354 598 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 TPTEP56180 551 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 SOX8P57073 446 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 NKX6-1P78426 367 aaPredicted RBP4□□□□□ -1.77
PTCD3-218ENST00000493430 FHL1Q13642 323 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 LAMB3Q13751 1172 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 CERKLQ49MI3 558 aaPredicted RBP4□□□□□ -1.77
PTCD3-218ENST00000493430 KHDC1LQ5JSQ8 128 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 GALNT4Q8N4A0 578 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 PRSS3P2Q8NHM4 247 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 SLC35A4Q96G79 324 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 CAMKK2Q96RR4 588 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 SMAD5Q99717 465 aaKnown RBP4□□□□□ -1.77
PTCD3-218ENST00000493430 WACQ9BTA9 647 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 SARS2Q9NP81 518 aaKnown RBP4□□□□□ -1.77
PTCD3-218ENST00000493430 NDRG4Q9ULP0 352 aaKnown RBP4□□□□□ -1.77
PTCD3-218ENST00000493430 EP400Q96L91 3159 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 PPIP5K1Q6PFW1 1433 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 C5P01031 1676 aa4□□□□□ -1.77
PTCD3-218ENST00000493430 RGPD3A6NKT7 1758 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-218ENST00000493430 RGPD4Q7Z3J3 1758 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 CD163L1Q9NR16 1453 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 ERC2O15083 957 aa3.99□□□□□ -1.77
PTCD3-218ENST00000493430 EXOC3O60645 756 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms