RNA–Protein interactions for RNA: ENST00000493427.1

ABCD4-215, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 736 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-215ENST00000493427 CLDN1O95832 211 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 PDCP20941 246 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 MUTP22033 750 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 MCM4P33991 863 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 ARL2P36404 184 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 GRIA2P42262 883 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 NLRP12P59046 1061 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 RESTQ13127 1097 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 CAPSQ13938 189 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 DTHD1Q6ZMT9 781 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 BRAPQ7Z569 592 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 ASAP3Q8TDY4 903 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 NACC1Q96RE7 527 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 MMTAG2Q9BU76 263 aaKnown RBP13.21□□□□□ -0.29
ABCD4-215ENST00000493427 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.21□□□□□ -0.29
ABCD4-215ENST00000493427 ANAPC2Q9UJX6 822 aa13.21□□□□□ -0.29
ABCD4-215ENST00000493427 ATXN7L1Q9ULK2 861 aaPredicted RBP13.21□□□□□ -0.29
ABCD4-215ENST00000493427 NUMA1Q14980 2115 aa13.21□□□□□ -0.3
ABCD4-215ENST00000493427 NIPBLQ6KC79 2804 aaeCLIP13.2□□□□□ -0.3
ABCD4-215ENST00000493427 A0A087X0B3 334 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 USO1O60763 962 aaKnown RBP13.2□□□□□ -0.3
ABCD4-215ENST00000493427 RTN2O75298 545 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 SEMA7AO75326 666 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 ITGAVP06756 1048 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 GLRA2P23416 452 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 CDC25AP30304 524 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 CCT6AP40227 531 aaKnown RBP13.2□□□□□ -0.3
ABCD4-215ENST00000493427 CTSKP43235 329 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 TNFRSF4P43489 277 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 CD97P48960 835 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 TFDP1Q14186 410 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 C3orf38Q5JPI3 329 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 PRAMEF14Q5SWL7 426 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 HAUS3Q68CZ6 603 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 SNX29Q8TEQ0 813 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
ABCD4-215ENST00000493427 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
ABCD4-215ENST00000493427 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 TIMM13Q9Y5L4 95 aaPredicted RBP13.2□□□□□ -0.3
ABCD4-215ENST00000493427 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
ABCD4-215ENST00000493427 PCSK5Q92824 1860 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 TTLL13PA6NNM8 815 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 MTSS1O43312 755 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 GJB6O95452 261 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 F11P03951 625 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 CKMP06732 381 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 PRF1P14222 555 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 ABCB4P21439 1286 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 RBMS1P29558 406 aaKnown RBP13.19□□□□□ -0.3
ABCD4-215ENST00000493427 NTSR1P30989 418 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 GRIA4P48058 902 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 YWHAHQ04917 246 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-215ENST00000493427 GPR17Q13304 367 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-215ENST00000493427 ZC2HC1CQ53FD0 456 aaPredicted RBP13.19□□□□□ -0.3
ABCD4-215ENST00000493427 ARL6IP4Q66PJ3 421 aaKnown RBP13.19□□□□□ -0.3
ABCD4-215ENST00000493427 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 STKLD1Q8NE28 680 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 SLC22A12Q96S37 553 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 RAB34Q9BZG1 259 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 TM9SF3Q9HD45 589 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 DDX19AQ9NUU7 478 aaKnown RBP13.19□□□□□ -0.3
ABCD4-215ENST00000493427 HCN2Q9UL51 889 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 SATB2Q9UPW6 733 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 MTMR6Q9Y217 621 aa13.19□□□□□ -0.3
ABCD4-215ENST00000493427 VWA3AA6NCI4 1184 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 TBC1D3BA6NDS4 549 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 CSO75390 466 aaKnown RBP13.18□□□□□ -0.3
ABCD4-215ENST00000493427 CKMT2P17540 419 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 CYP11B2P19099 503 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 MGAT5BQ3V5L5 792 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 EGFLAMQ63HQ2 1017 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 FAM173BQ6P4H8 233 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 MAEAQ7L5Y9 396 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 MCPH1Q8NEM0 835 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 ACOX2Q99424 681 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
ABCD4-215ENST00000493427 BHMT2Q9H2M3 363 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
ABCD4-215ENST00000493427 A0A0A0MRY4 1105 aa13.17□□□□□ -0.3
ABCD4-215ENST00000493427 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
ABCD4-215ENST00000493427 KCNJ18B7U540 433 aa13.17□□□□□ -0.3
ABCD4-215ENST00000493427 E9PMD0 336 aa13.17□□□□□ -0.3
ABCD4-215ENST00000493427 N4BP3O15049 544 aa13.17□□□□□ -0.3
ABCD4-215ENST00000493427 TADA3O75528 432 aa13.17□□□□□ -0.3
ABCD4-215ENST00000493427 MARCKSP29966 332 aaPredicted RBP13.17□□□□□ -0.3
ABCD4-215ENST00000493427 EIF2DP41214 584 aaKnown RBP13.17□□□□□ -0.3
ABCD4-215ENST00000493427 GRIN1Q05586 938 aa13.17□□□□□ -0.3
ABCD4-215ENST00000493427 TMEM132AQ24JP5 1023 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms