RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NDC80O14777 642 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 FBXO21O94952 628 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 APOC2P02655 101 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 MATKP42679 507 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 CDK7P50613 346 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 ITGA8P53708 1063 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 HDAC4P56524 1084 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 MRPS5P82675 430 aaKnown RBP14.67□□□□□ -0.06
PTPN7-216ENST00000492977 DPYSL3Q14195 570 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 CEP85LQ5SZL2 805 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 SCYL2Q6P3W7 929 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 CD300LGQ6UXG3 332 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 STRADAQ7RTN6 431 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 ACTL9Q8TC94 416 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 FOXP3Q9BZS1 431 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 FAM204AQ9H8W3 233 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 PSD3Q9NYI0 1048 aa14.67□□□□□ -0.06
PTPN7-216ENST00000492977 TIMM13Q9Y5L4 95 aaPredicted RBP14.67□□□□□ -0.06
PTPN7-216ENST00000492977 MYBPHLA2RUH7 354 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 DNM1LO00429 736 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 AP1G2O75843 785 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 BEST1O76090 585 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 NUDT17P0C025 328 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 COL6A1P12109 1028 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 SELPP16109 830 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 IBSPP21815 317 aaPredicted RBP14.66□□□□□ -0.06
PTPN7-216ENST00000492977 GYS2P54840 703 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 YWHAZP63104 245 aaKnown RBP14.66□□□□□ -0.06
PTPN7-216ENST00000492977 OTUD4Q01804 1114 aaKnown RBP14.66□□□□□ -0.06
PTPN7-216ENST00000492977 ADCY1Q08828 1119 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 ADIGQ0VDE8 80 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 BFSP2Q13515 415 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 KRT81Q14533 505 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 RAB6CQ53S08 254 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 TTMPQ5BVD1 217 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 ERMARDQ5T6L9 678 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 CEP128Q6ZU80 1094 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 TRMT10CQ7L0Y3 403 aaKnown RBP14.66□□□□□ -0.06
PTPN7-216ENST00000492977 FAM35AQ86V20 835 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 SIX6OS1Q8N1H7 587 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 FAM76AQ8TAV0 307 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 ARL8AQ96BM9 186 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 PCED1BQ96HM7 432 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 SUSD3Q96L08 255 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 RNF157Q96PX1 679 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 RAB6CQ9H0N0 254 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 TMBIM4Q9HC24 238 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 KRT82Q9NSB4 513 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 KANSL3Q9P2N6 904 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 TRIM17Q9Y577 477 aa14.66□□□□□ -0.06
PTPN7-216ENST00000492977 DAB1O75553 588 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 MYZAPP0CAP1 466 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 TYMPP19971 482 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 MAP3K7CLP57077 242 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 DYNLT1P63172 113 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 ZNF844Q08AG5 666 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 CCDC142Q17RM4 750 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 SLC25A52Q3SY17 297 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 IZUMO3Q5VZ72 239 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 DENND2CQ68D51 928 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 FAM171BQ6P995 826 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 LRRC8DQ7L1W4 858 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 THEM5Q8N1Q8 247 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 URGCPQ8TCY9 931 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 RSPH1Q8WYR4 309 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 HAUS1Q96CS2 278 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 SMARCD1Q96GM5 515 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 SMOQ99835 787 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 RTP3Q9BQQ7 232 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 ZNF670Q9BS34 389 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 SNRNP25Q9BV90 132 aaKnown RBP14.65□□□□□ -0.06
PTPN7-216ENST00000492977 EPB41L4BQ9H329 900 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 PCDH9Q9HC56 1237 aa14.65□□□□□ -0.06
PTPN7-216ENST00000492977 HMGB1P1B2RPK0 211 aaPredicted RBP14.64□□□□□ -0.07
PTPN7-216ENST00000492977 SGK1O00141 431 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 NOS2P35228 1153 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 BRCC3P46736 316 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 VPS41P49754 854 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 TKTL1P51854 596 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 DSC1Q08554 894 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 MMRN1Q13201 1228 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 MAPRE1Q15691 268 aaKnown RBP14.64□□□□□ -0.07
PTPN7-216ENST00000492977 P3H1Q32P28 736 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 NOMO2Q5JPE7 1267 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 INTS6LQ5JSJ4 861 aaKnown RBP14.64□□□□□ -0.07
PTPN7-216ENST00000492977 RAB41Q5JT25 222 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 HIBCHQ6NVY1 386 aaPredicted RBP14.64□□□□□ -0.07
PTPN7-216ENST00000492977 CROCCP2Q86T23 111 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 PSTKQ8IV42 348 aaKnown RBP14.64□□□□□ -0.07
PTPN7-216ENST00000492977 DEFB106AQ8N104 65 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 LINC01599Q8WXQ3 324 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 NT5C3BQ969T7 300 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 FAF2Q96CS3 445 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 TMEM121Q9BTD3 319 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 SEMA4AQ9H3S1 761 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 PCDH18Q9HCL0 1135 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 CSNK1G1Q9HCP0 422 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 CNGB3Q9NQW8 809 aa14.64□□□□□ -0.07
PTPN7-216ENST00000492977 TSC2P49815 1807 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms