RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 KBTBD6Q86V97 674 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 EZH1Q92800 747 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 CNOT6LQ96LI5 555 aaKnown RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 CDK5RAP1Q96SZ6 601 aaKnown RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 SMOQ99835 787 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 NIF3L1Q9GZT8 377 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 ARHGEF4Q9NR80 690 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 DEC1Q9P2X7 70 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 HOOK1Q9UJC3 728 aaKnown RBP13.17□□□□□ -0.3
COL6A1-205ENST00000492851 SCML2Q9UQR0 700 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 PCDHA5Q9Y5H7 936 aa13.17□□□□□ -0.3
COL6A1-205ENST00000492851 DCDC2BA2VCK2 349 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 CETN3O15182 167 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 ZBTB24O43167 697 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-205ENST00000492851 TLR5O60602 858 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 CCDC130P13994 396 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 GCLMP48507 274 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 SLC8A3P57103 927 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 CRY1Q16526 586 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 C1orf220Q5T0J3 134 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 NAIF1Q69YI7 327 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-205ENST00000492851 KLHDC10Q6PID8 442 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 HTR3DQ70Z44 454 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 ZNF276Q8N554 614 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 C12orf29Q8N999 325 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 DUSP15Q9H1R2 295 aaPredicted RBP13.16□□□□□ -0.3
COL6A1-205ENST00000492851 CCSER2Q9H7U1 834 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 CYLDQ9NQC7 956 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL6A1-205ENST00000492851 SPHK2Q9NRA0 654 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 GMIPQ9P107 970 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 WDR35Q9P2L0 1181 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 LSM7Q9UK45 103 aaKnown RBP13.16□□□□□ -0.3
COL6A1-205ENST00000492851 MAPK8IP1Q9UQF2 711 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 OBSL1O75147 1896 aa13.16□□□□□ -0.3
COL6A1-205ENST00000492851 DCHS1Q96JQ0 3298 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 TBC1D3BA6NDS4 549 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 HOXC11O43248 304 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-205ENST00000492851 BEST1O76090 585 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 SMC2O95347 1197 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 EPB41P11171 864 aaKnown RBP13.15□□□□□ -0.3
COL6A1-205ENST00000492851 MPLP40238 635 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 PLA2G4AP47712 749 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 SLC6A11P48066 632 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 SEC13P55735 322 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 BECN1Q14457 450 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 GAB4Q2WGN9 574 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 LY6G5CQ5SRR4 150 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 SPOPLQ6IQ16 392 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 FBXL13Q8NEE6 735 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 ZMIZ2Q8NF64 920 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 TAS1R2Q8TE23 839 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 ZFRQ96KR1 1074 aaKnown RBP13.15□□□□□ -0.3
COL6A1-205ENST00000492851 GSDMAQ96QA5 445 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 XPO6Q96QU8 1125 aaKnown RBP13.15□□□□□ -0.3
COL6A1-205ENST00000492851 TSG101Q99816 390 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 DUSP16Q9BY84 665 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 FAM49BQ9NUQ9 324 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 ZNF510Q9Y2H8 683 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 GPR179Q6PRD1 2367 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 DMXL1Q9Y485 3027 aa13.15□□□□□ -0.3
COL6A1-205ENST00000492851 ZNF638Q14966 1978 aaKnown RBP13.14□□□□□ -0.31
COL6A1-205ENST00000492851 CILPO75339 1184 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 TRIM49P0CI25 452 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 TRIM49CP0CI26 452 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 RALAP11233 206 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
COL6A1-205ENST00000492851 ADORA2BP29275 332 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 GBP1P32455 592 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 DPP6P42658 865 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 NUCB2P80303 420 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 PPP3CAQ08209 521 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 E2F5Q15329 346 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 ANO4Q32M45 955 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 ZCWPW2Q504Y3 356 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 SDE2Q6IQ49 451 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 ANO7Q6IWH7 933 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 CLEC20AQ6ZU45 233 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 ARHGAP18Q8N392 663 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 IL17RCQ8NAC3 791 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 SPACA7Q96KW9 195 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
COL6A1-205ENST00000492851 RAB20Q9NX57 234 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 DNMT3LQ9UJW3 386 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 STARD13Q9Y3M8 1113 aa13.14□□□□□ -0.31
COL6A1-205ENST00000492851 DNAH14Q0VDD8 3507 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 BCLAF3A2AJT9 711 aaKnown RBP13.13□□□□□ -0.31
COL6A1-205ENST00000492851 CAVIN2O95810 425 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 RARGP13631 454 aa13.13□□□□□ -0.31
COL6A1-205ENST00000492851 CD58P19256 250 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms