RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SHC3Q92529 594 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 ATP2A3Q93084 1043 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 FOXQ1Q9C009 403 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 NACA2Q9H009 215 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 CCSER2Q9H7U1 834 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 LRRC4Q9HBW1 653 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 HPS4Q9NQG7 708 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 GKN1Q9NS71 199 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 FANCLQ9NW38 375 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 DUS2Q9NX74 493 aaKnown RBP11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 GTSE1Q9NYZ3 720 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 CLIC5Q9NZA1 410 aa11.22□□□□□ -0.61
CDC42SE1-206ENST00000492796 A0A1W2PQH9 124 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 SHISA7A6NL88 538 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 SPECC1L-ADORA2AF8WAN1 911 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 SLC9A3R1O14745 358 aaPredicted RBP11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 PI15O43692 258 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 NFATC1O95644 943 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZBED1O96006 694 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 RALAP11233 206 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 BRD2P25440 801 aaKnown RBP11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 TARSP26639 723 aaKnown RBP11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 GNA15P30679 374 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 CTHP32929 405 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ATP5C1P36542 298 aaKnown RBP11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 TKTL1P51854 596 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 PTPN5P54829 565 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZXDBP98169 803 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 TNK2Q07912 1038 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 GOLGA8FQ08AF8 430 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 GOLGA8DPQ0D2H9 430 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ARHGAP44Q17R89 818 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 EML3Q32P44 896 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ANO6Q4KMQ2 910 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 FKBP15Q5T1M5 1219 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 TRIM68Q6AZZ1 485 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 PM20D1Q6GTS8 502 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 GJB7Q6PEY0 223 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 SIX6OS1Q8N1H7 587 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 SCML4Q8N228 414 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 UBA3Q8TBC4 463 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 FAM3CQ92520 227 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 EXOC4Q96A65 974 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZFRQ96KR1 1074 aaKnown RBP11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZSWIM1Q9BR11 485 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 IER2Q9BTL4 223 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 IRF2BPLQ9H1B7 796 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 EBF3Q9H4W6 596 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 NMUR1Q9HB89 426 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 SMPD4Q9NXE4 827 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 TAB2Q9NYJ8 693 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 DLGAP2Q9P1A6 1054 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 NAGPAQ9UK23 515 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 DNAJC12Q9UKB3 198 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 DAAM1Q9Y4D1 1078 aa11.21□□□□□ -0.61
CDC42SE1-206ENST00000492796 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 E2F8A0AVK6 867 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 FAM170BA6NMN3 283 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 BECN2A8MW95 431 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 RARGP13631 454 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 ZNF18P17022 549 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 CD72P21854 359 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 RPS9P46781 194 aaKnown RBP11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 APBA1Q02410 837 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 ADIGQ0VDE8 80 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 KCNMA1Q12791 1236 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 NR1H3Q13133 447 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 NCAPHQ15003 741 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 SKOR2Q2VWA4 1001 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 SCD5Q86SK9 330 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 AOPEPQ8N6M6 819 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 DTWD2Q8NBA8 298 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 TTC16Q8NEE8 873 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 PRSS33Q8NF86 280 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 SECISBP2LQ93073 1101 aaKnown RBP11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 CLDN23Q96B33 292 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 OTUB2Q96DC9 234 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 HSFY1Q96LI6 401 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 ULBP1Q9BZM6 244 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 VPS16Q9H269 839 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 ECT2Q9H8V3 914 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 PLCB1Q9NQ66 1216 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 CNGB3Q9NQW8 809 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 OSER1Q9NX31 292 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 CFAP97Q9P2B7 532 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 TBC1D14Q9P2M4 693 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 LIMA1Q9UHB6 759 aaKnown RBP11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 SH3BP1Q9Y3L3 701 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 WNT6Q9Y6F9 365 aa11.2□□□□□ -0.62
CDC42SE1-206ENST00000492796 SMTNL1A8MU46 457 aa11.19□□□□□ -0.62
CDC42SE1-206ENST00000492796 TULP2O00295 520 aa11.19□□□□□ -0.62
CDC42SE1-206ENST00000492796 THAP12O43422 761 aa11.19□□□□□ -0.62
CDC42SE1-206ENST00000492796 FBXO21O94952 628 aa11.19□□□□□ -0.62
CDC42SE1-206ENST00000492796 DCNP07585 359 aaKnown RBP11.19□□□□□ -0.62
CDC42SE1-206ENST00000492796 ARSAP15289 507 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms