RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RAB44Q7Z6P3 723 aaPredicted RBP13.98□□□□□ -0.17
HDAC3-213ENST00000492506 BRSK2Q8IWQ3 736 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 ADGRF2Q8IZF7 708 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 PHTF2Q8N3S3 785 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 CHCHD4Q8N4Q1 142 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 TOP6BLQ8N6T0 577 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 POMGNT1Q8WZA1 660 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 MRFAP1L1Q96HT8 127 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 SPACA7Q96KW9 195 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 PNKPQ96T60 521 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 UBXN6Q9BZV1 441 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 CRTAC1Q9NQ79 661 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 SIX4Q9UIU6 781 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 SLC6A14Q9UN76 642 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 JRKLQ9Y4A0 524 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 GPSM3Q9Y4H4 160 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 SNX9Q9Y5X1 595 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 APC2O95996 2303 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 ZNF840PA6NDX5 716 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 MYMKA6NI61 221 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 H0Y626 953 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 SCAMP3O14828 347 aaKnown RBP13.97□□□□□ -0.17
HDAC3-213ENST00000492506 TBCAO75347 108 aaKnown RBP13.97□□□□□ -0.17
HDAC3-213ENST00000492506 TRIM16O95361 564 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 KRT18P05783 430 aaKnown RBP13.97□□□□□ -0.17
HDAC3-213ENST00000492506 SERPINF2P08697 491 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 CD59P13987 128 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 LMO2P25791 158 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 UBA7P41226 1012 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 DPP6P42658 865 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 LHX1P48742 406 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 PDE6CP51160 858 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 GRIN1Q05586 938 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 POSTNQ15063 836 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 EOGTQ5NDL2 527 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 KRBA2Q6ZNG9 492 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 CCDC186Q7Z3E2 898 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 KBTBD7Q8WVZ9 684 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 HMGB4Q8WW32 186 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 CALML4Q96GE6 196 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 CEP295NLQ96MC4 621 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 FAM213AQ9BRX8 229 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 TTLL2Q9BWV7 592 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 POLMQ9NP87 494 aaPredicted RBP13.97□□□□□ -0.17
HDAC3-213ENST00000492506 DONSONQ9NYP3 566 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 FHOD1Q9Y613 1164 aa13.97□□□□□ -0.17
HDAC3-213ENST00000492506 TCRBV21S2A2A0A5A6 115 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 ZRANB2O95218 330 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC3-213ENST00000492506 CPP00450 1065 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 OAS1P00973 400 aaKnown RBP13.96□□□□□ -0.17
HDAC3-213ENST00000492506 APODP05090 189 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 CFIP05156 583 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 PCSK1P29120 753 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 TNFRSF4P43489 277 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 TUBB4BP68371 445 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 DUOXA1Q1HG43 343 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 SOWAHCQ53LP3 525 aaPredicted RBP13.96□□□□□ -0.17
HDAC3-213ENST00000492506 LMBRD2Q68DH5 695 aaPredicted RBP13.96□□□□□ -0.17
HDAC3-213ENST00000492506 VSTM1Q6UX27 236 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 SYT10Q6XYQ8 523 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 C4orf50Q6ZRC1 276 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 DENND5BQ6ZUT9 1274 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 SFR1Q86XK3 245 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 CSGALNACT2Q8N6G5 542 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 OR2I1PQ8NGU4 316 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 MYLPFQ96A32 169 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 HVCN1Q96D96 273 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 SAAL1Q96ER3 474 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 TRPM5Q9NZQ8 1165 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 MAGEC2Q9UBF1 373 aaPredicted RBP13.96□□□□□ -0.17
HDAC3-213ENST00000492506 ITGA11Q9UKX5 1188 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 HCN2Q9UL51 889 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 CPQQ9Y646 472 aa13.96□□□□□ -0.17
HDAC3-213ENST00000492506 HELZ2Q9BYK8 2649 aaKnown RBP13.96□□□□□ -0.17
HDAC3-213ENST00000492506 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 GJB3O75712 270 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 BDNFP23560 247 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 GRIA2P42262 883 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 PSMC1P62191 440 aaKnown RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 RBP5P82980 135 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 RESTQ13127 1097 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 BYSLQ13895 437 aaKnown RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 ZNF423Q2M1K9 1284 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 DPH6Q7L8W6 267 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 ETFBKMTQ8IXQ9 262 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 HDDC3Q8N4P3 179 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 MINDY1Q8N5J2 469 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 DEFB119Q8N690 84 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 SPC24Q8NBT2 197 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 CEP76Q8TAP6 659 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 CACTINQ8WUQ7 758 aaKnown RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 LARP4BQ92615 738 aaKnown RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 SYT15Q9BQS2 421 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 GTPBP2Q9BX10 602 aaKnown RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 NUP62CLQ9H1M0 184 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 MED4Q9NPJ6 270 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 ARHGEF4Q9NR80 690 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 TMEM30AQ9NV96 361 aa13.95□□□□□ -0.18
HDAC3-213ENST00000492506 DNAAF2Q9NVR5 837 aaKnown RBP13.95□□□□□ -0.18
HDAC3-213ENST00000492506 SMPD4Q9NXE4 827 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms