RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 CPNE5Q9HCH3 593 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ARFGAP3Q9NP61 516 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 IL17RBQ9NRM6 502 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 KCTD5Q9NXV2 234 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 RGL1Q9NZL6 768 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 SLC39A10Q9ULF5 831 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ADGRA2Q96PE1 1338 aa3.46□□□□□ -1.85
HMGB1P30-201ENST00000492455 H3BNC9 293 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 DHHO43323 396 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 TRIAP1O43715 76 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 SRGAP2O75044 1071 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 TCEA3O75764 348 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 PIAS2O75928 621 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 VNN1O95497 513 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 PRKCGP05129 697 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 HGFP14210 728 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 VEGFAP15692 232 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 TPH1P17752 444 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 EGR1P18146 543 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 MST1P26927 711 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 ITPKBP27987 946 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 HTR7P34969 479 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 TECP42680 631 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 ALDH9A1P49189 494 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 TNFAIP2Q03169 654 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 RAB30Q15771 203 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 SFRP4Q6FHJ7 346 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZNF517Q6ZMY9 492 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 DTX2Q86UW9 622 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 CCDC28AQ8IWP9 274 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 SMC5Q8IY18 1101 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 ABRAQ8N0Z2 381 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 ENAHQ8N8S7 591 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 ACRBPQ8NEB7 543 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 MORC4Q8TE76 937 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 IPO4Q8TEX9 1081 aaKnown RBP3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 PTCD3Q96EY7 689 aaKnown RBP3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 FAM227BQ96M60 508 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 TPSD1Q9BZJ3 242 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 VPS33BQ9H267 617 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 FAM83DQ9H4H8 585 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 TMEM8AQ9HCN3 771 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 HEYLQ9NQ87 328 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 DKK3Q9UBP4 350 aa3.46□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZNF521Q96K83 1311 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 OR2W5A6NFC9 320 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 AQP7P3A6NL99 342 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 AQP12BA6NM10 295 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 PODXLO00592 558 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 NPC1O15118 1278 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 PIP5K1CO60331 668 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 CBFA2T3O75081 653 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 RASAL1O95294 804 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 ELFN1P0C7U0 828 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 PECAM1P16284 738 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 NTSR1P30989 418 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 UQCRC1P31930 480 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 ATICP31939 592 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 LIPAP38571 399 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 PDE6CP51160 858 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 CLCN2P51788 898 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 BCAT1P54687 386 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 TUBA4AP68366 448 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 EIF2B5Q13144 721 aaKnown RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 E2F2Q14209 437 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 PUM3Q15397 648 aaKnown RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 TXNRD1Q16881 649 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 SLC5A9Q2M3M2 681 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 GRAMD1BQ3KR37 738 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 ARHGAP15Q53QZ3 475 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 CERCAMQ5T4B2 595 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 TMTC4Q5T4D3 741 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 DEPDC1Q5TB30 811 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 LIN54Q6MZP7 749 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 CCDC174Q6PII3 467 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 SLC15A3Q8IY34 581 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 EXOC8Q8IYI6 725 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 SYTL1Q8IYJ3 562 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 NKAPQ8N5F7 415 aaKnown RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 IPCEF1Q8WWN9 437 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 RFKQ969G6 155 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 SARAFQ96BY9 339 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZBTB45Q96K62 511 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 MAGEB5Q9BZ81 275 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 PCDHAC1Q9H158 963 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 NECTIN3Q9NQS3 549 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 TM7SF3Q9NS93 570 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 WWOXQ9NZC7 414 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZNF580Q9UK33 172 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 RIMKLBQ9ULI2 386 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 ZMYND8Q9ULU4 1186 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 SCAF8Q9UPN6 1271 aaKnown RBP3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 HPSEQ9Y251 543 aa3.45□□□□□ -1.86
HMGB1P30-201ENST00000492455 LOC102724159A0A0B4J2E5 919 aa3.44□□□□□ -1.86
HMGB1P30-201ENST00000492455 PLEKHD1A6NEE1 506 aa3.44□□□□□ -1.86
HMGB1P30-201ENST00000492455 GOLGA6L3A6NEY3 463 aa3.44□□□□□ -1.86
HMGB1P30-201ENST00000492455 LGALS16A8MUM7 142 aa3.44□□□□□ -1.86
HMGB1P30-201ENST00000492455 PCDH17O14917 1159 aa3.44□□□□□ -1.86
HMGB1P30-201ENST00000492455 YY2O15391 372 aa3.44□□□□□ -1.86
HMGB1P30-201ENST00000492455 FFAR2O15552 330 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms