RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 INCA1Q0VD86 236 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 DPYDQ12882 1025 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 IFRD2Q12894 506 aaPredicted RBP9.26□□□□□ -0.93
NUP50-217ENST00000491860 SRSF5Q13243 272 aaKnown RBP9.26□□□□□ -0.93
NUP50-217ENST00000491860 ADAM9Q13443 819 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 PKP1Q13835 747 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 EDRF1Q3B7T1 1238 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 KLHDC10Q6PID8 442 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 SCARA5Q6ZMJ2 495 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 KRBA2Q6ZNG9 492 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 ACOT1Q86TX2 421 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 FAM186BQ8IYM0 893 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 FUKQ8N0W3 1084 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 ZNF276Q8N554 614 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 PLEKHO2Q8TD55 490 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 SPACA7Q96KW9 195 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 CNOT6LQ96LI5 555 aaKnown RBP9.26□□□□□ -0.93
NUP50-217ENST00000491860 HNRNPABQ99729 332 aaKnown RBP9.26□□□□□ -0.93
NUP50-217ENST00000491860 NIF3L1Q9GZT8 377 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 RNF38Q9H0F5 515 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 LINC00597Q9H2U6 94 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 FBRSL1Q9HCM7 1045 aaKnown RBP9.26□□□□□ -0.93
NUP50-217ENST00000491860 SMPD4Q9NXE4 827 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 ZNF510Q9Y2H8 683 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 NME7Q9Y5B8 376 aa9.26□□□□□ -0.93
NUP50-217ENST00000491860 SDK1Q7Z5N4 2213 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 EML5Q05BV3 1969 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 GOLGA6L4A6NEF3 574 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 K7EQS6 105 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 TM4SF5O14894 197 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 CETN3O15182 167 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 HOXC11O43248 304 aaPredicted RBP9.25□□□□□ -0.93
NUP50-217ENST00000491860 COCHO43405 550 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 TLR5O60602 858 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 KAT7O95251 611 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 VNN1O95497 513 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 EPB41P11171 864 aaKnown RBP9.25□□□□□ -0.93
NUP50-217ENST00000491860 ATP5C1P36542 298 aaKnown RBP9.25□□□□□ -0.93
NUP50-217ENST00000491860 ASPAP45381 313 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 NDUFA8P51970 172 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 CACNA2D1P54289 1103 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 MCCD1P59942 119 aaPredicted RBP9.25□□□□□ -0.93
NUP50-217ENST00000491860 BECN1Q14457 450 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 CRY1Q16526 586 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 PLK5Q496M5 336 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 SPDYCQ5MJ68 293 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 KRT39Q6A163 491 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 PKN3Q6P5Z2 889 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 RHBDF2Q6PJF5 856 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 PAQR9Q6ZVX9 377 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 KBTBD6Q86V97 674 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 RASSF3Q86WH2 238 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 ARHGAP18Q8N392 663 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 SLC2A14Q8TDB8 520 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 WHAMMQ8TF30 809 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 CYFIP2Q96F07 1278 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 XPO6Q96QU8 1125 aaKnown RBP9.25□□□□□ -0.93
NUP50-217ENST00000491860 HHIPQ96QV1 700 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 KCNK16Q96T55 309 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 TSG101Q99816 390 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 ARRDC1-AS1Q9H2J1 176 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 TMEM8AQ9HCN3 771 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 ARHGEF4Q9NR80 690 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 C2orf42Q9NWW7 574 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 WDR35Q9P2L0 1181 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 DEC1Q9P2X7 70 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 SCML2Q9UQR0 700 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 FAM208BQ5VWN6 2430 aa9.25□□□□□ -0.93
NUP50-217ENST00000491860 ZNF202O95125 648 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 SMC2O95347 1197 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 RALAP11233 206 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 GBP1P32455 592 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 MPLP40238 635 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 PPP1R2P41236 205 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 PLA2G4AP47712 749 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 PXNP49023 591 aaPredicted RBP9.24□□□□□ -0.93
NUP50-217ENST00000491860 MAP3K7CLP57077 242 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 YWHAEP62258 255 aaKnown RBP9.24□□□□□ -0.93
NUP50-217ENST00000491860 DLG4P78352 724 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 ZXDBP98169 803 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 COBLL1Q53SF7 1204 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 C2orf27AQ580R0 203 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 SDE2Q6IQ49 451 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 HTR3DQ70Z44 454 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 CCDC186Q7Z3E2 898 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 FBXL13Q8NEE6 735 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 SCAMP5Q8TAC9 235 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 EZH1Q92800 747 aaPredicted RBP9.24□□□□□ -0.93
NUP50-217ENST00000491860 ZFRQ96KR1 1074 aaKnown RBP9.24□□□□□ -0.93
NUP50-217ENST00000491860 GSDMAQ96QA5 445 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 SMOQ99835 787 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 UBXN6Q9BZV1 441 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 DCLK3Q9C098 648 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 SDCBP2Q9H190 292 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 SPHK2Q9NRA0 654 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 TMEM30AQ9NV96 361 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 GMIPQ9P107 970 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms