RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 COCHO43405 550 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 MED7O43513 233 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 MBL2P11226 248 aaPredicted RBP24.47■■□□□ 1.51
CPNE9-204ENST00000491802 TKTL1P51854 596 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 SLC7A9P82251 487 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 UBXN1Q04323 297 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 ADIGQ0VDE8 80 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 MTF1Q14872 753 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 DRAP1Q14919 205 aaPredicted RBP24.47■■□□□ 1.51
CPNE9-204ENST00000491802 SYCP1Q15431 976 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 MSANTD3Q96H12 275 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 OSBPL6Q9BZF3 934 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 GANQ9H2C0 597 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 NMUR1Q9HB89 426 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 LRRC4Q9HBW1 653 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 FAM207AQ9NSI2 230 aaPredicted RBP24.47■■□□□ 1.51
CPNE9-204ENST00000491802 THG1LQ9NWX6 298 aaKnown RBP24.47■■□□□ 1.51
CPNE9-204ENST00000491802 SIK3Q9Y2K2 1263 aa24.47■■□□□ 1.51
CPNE9-204ENST00000491802 COL4A3Q01955 1670 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 FOXN3O00409 490 aaPredicted RBP24.46■■□□□ 1.51
CPNE9-204ENST00000491802 TLR5O60602 858 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 RGS7P49802 495 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 C1orf228Q6PIY5 440 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 SIX6OS1Q8N1H7 587 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 TMEM105Q8N8V8 129 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 FLCNQ8NFG4 579 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 SLC35F5Q8WV83 523 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 NAA15Q9BXJ9 866 aaKnown RBP24.46■■□□□ 1.51
CPNE9-204ENST00000491802 ULBP1Q9BZM6 244 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 NACA2Q9H009 215 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 HEBP1Q9NRV9 189 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 OSER1Q9NX31 292 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 NAGPAQ9UK23 515 aa24.46■■□□□ 1.51
CPNE9-204ENST00000491802 KANSL1LA0AUZ9 987 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 ZXDBP98169 803 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 CC2D1AQ6P1N0 951 aaPredicted RBP24.45■■□□□ 1.5
CPNE9-204ENST00000491802 DENND1BQ6P3S1 775 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 TPRG1Q6ZUI0 275 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 SCD5Q86SK9 330 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 LUZP1Q86V48 1076 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 FAM71AQ8IYT1 594 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 CSGALNACT1Q8TDX6 532 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 ZNF606Q8WXB4 792 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 KCTD13Q8WZ19 329 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 PCMTD1Q96MG8 357 aaPredicted RBP24.45■■□□□ 1.5
CPNE9-204ENST00000491802 CYLDQ9NQC7 956 aa24.45■■□□□ 1.5
CPNE9-204ENST00000491802 LEFTY2O00292 366 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 EPHB6O15197 1021 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 ZBED1O96006 694 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 PSEN1P49768 467 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 PTK2Q05397 1052 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 MEA1Q16626 185 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 PMF1Q6P1K2 205 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 NELL2Q99435 816 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 FAM83CQ9BQN1 747 aa24.44■■□□□ 1.5
CPNE9-204ENST00000491802 SHISA7A6NL88 538 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 F8VZ95 297 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 STK25O00506 426 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 MAN2B1O00754 1011 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 CAVIN2O95810 425 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 RARGP13631 454 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 LCP1P13796 627 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 CLCN1P35523 988 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 POLR2FP61218 127 aaKnown RBP24.43■■□□□ 1.5
CPNE9-204ENST00000491802 TPM4P67936 248 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 TNK2Q07912 1038 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 TRIM68Q6AZZ1 485 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 SLC47A2Q86VL8 602 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 ARHGAP18Q8N392 663 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 PJA1Q8NG27 643 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 ZFRQ96KR1 1074 aaKnown RBP24.43■■□□□ 1.5
CPNE9-204ENST00000491802 ERGIC2Q96RQ1 377 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 GKN1Q9NS71 199 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.43■■□□□ 1.5
CPNE9-204ENST00000491802 CFAP97Q9P2B7 532 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 WNT6Q9Y6F9 365 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 PIAS3Q9Y6X2 628 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 CACNA1HO95180 2353 aa24.43■■□□□ 1.5
CPNE9-204ENST00000491802 PIK3R2O00459 728 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 GPD2P43304 727 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 YWHAGP61981 247 aaKnown RBP eCLIP24.42■■□□□ 1.5
CPNE9-204ENST00000491802 PM20D1Q6GTS8 502 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 ZNF852Q6ZMS4 543 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 BHLHA9Q7RTU4 235 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 DDX42Q86XP3 938 aaKnown RBP eCLIP24.42■■□□□ 1.5
CPNE9-204ENST00000491802 NEK11Q8NG66 645 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 TTC8Q8TAM2 541 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 NDRG1Q92597 394 aaKnown RBP24.42■■□□□ 1.5
CPNE9-204ENST00000491802 HSFY1Q96LI6 401 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 STK33Q9BYT3 514 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 C8orf33Q9H7E9 229 aaPredicted RBP24.42■■□□□ 1.5
CPNE9-204ENST00000491802 CNGB3Q9NQW8 809 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 GTSE1Q9NYZ3 720 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 CLIC5Q9NZA1 410 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 DLGAP2Q9P1A6 1054 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 NUDT5Q9UKK9 219 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 MRPS17Q9Y2R5 130 aaKnown RBP24.42■■□□□ 1.5
CPNE9-204ENST00000491802 SIT1Q9Y3P8 196 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 DAAM1Q9Y4D1 1078 aa24.42■■□□□ 1.5
CPNE9-204ENST00000491802 PI15O43692 258 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms