RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 ACAT1P24752 427 aaKnown RBP23.85■■□□□ 1.41
USF3-203ENST00000491165 SSTR3P32745 418 aaPredicted RBP23.85■■□□□ 1.41
USF3-203ENST00000491165 PDE6CP51160 858 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 RWDD2BP57060 319 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 SWT1Q5T5J6 900 aaKnown RBP23.85■■□□□ 1.41
USF3-203ENST00000491165 C12orf29Q8N999 325 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 P3H4Q92791 437 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 ART4Q93070 314 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 BTBD6Q96KE9 485 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 ZNF558Q96NG5 402 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 SMIM23A6NLE4 172 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 CYP11A1P05108 521 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 ODC1P11926 461 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 RARGP13631 454 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 CDR2Q01850 454 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 ANKRD20A8PQ5CZ79 823 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 FAM171A1Q5VUB5 890 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 C12orf50Q8NA57 414 aaPredicted RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 TFAP2BQ92481 460 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 DDX1Q92499 740 aaKnown RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 CCDC114Q96M63 670 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 STMN4Q9H169 189 aaPredicted RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 LINC01553A4QN01 128 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 RIPK2O43353 540 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 ATP2C2O75185 946 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 RARAP10276 462 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 LAG3P18627 525 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 WARSP23381 471 aaKnown RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 GNL1P36915 607 aaPredicted RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 SIX1Q15475 284 aaPredicted RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 RTP2Q5QGT7 225 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 RNF168Q8IYW5 571 aaPredicted RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 ADAM7Q9H2U9 754 aa23.84■■□□□ 1.41
USF3-203ENST00000491165 DDX43Q9NXZ2 648 aaKnown RBP23.84■■□□□ 1.41
USF3-203ENST00000491165 XIRP2A4UGR9 3374 aa23.83■■□□□ 1.41
USF3-203ENST00000491165 A8MXQ7 604 aa23.83■■□□□ 1.41
USF3-203ENST00000491165 PSMC1P62191 440 aaKnown RBP23.83■■□□□ 1.41
USF3-203ENST00000491165 ACOT1Q86TX2 421 aa23.83■■□□□ 1.41
USF3-203ENST00000491165 CEP57Q86XR8 500 aa23.83■■□□□ 1.41
USF3-203ENST00000491165 CPNE8Q86YQ8 564 aa23.83■■□□□ 1.41
USF3-203ENST00000491165 ATXN2LQ8WWM7 1075 aaKnown RBP23.83■■□□□ 1.41
USF3-203ENST00000491165 PCDHB8Q9UN66 801 aa23.83■■□□□ 1.41
USF3-203ENST00000491165 YBX2Q9Y2T7 364 aaKnown RBP23.83■■□□□ 1.41
USF3-203ENST00000491165 SF3B1O75533 1304 aaKnown RBP eCLIP23.83■■□□□ 1.43e-9■■■■■ 206.8
USF3-203ENST00000491165 ECEL1O95672 775 aa23.83■■□□□ 1.4
USF3-203ENST00000491165 CA3P07451 260 aa23.83■■□□□ 1.4
USF3-203ENST00000491165 IFI35P80217 286 aaPredicted RBP23.83■■□□□ 1.4
USF3-203ENST00000491165 TMEM176AQ96HP8 235 aa23.83■■□□□ 1.4
USF3-203ENST00000491165 ZNF317Q96PQ6 595 aaPredicted RBP23.83■■□□□ 1.4
USF3-203ENST00000491165 TMEM209Q96SK2 561 aa23.83■■□□□ 1.4
USF3-203ENST00000491165 PLVAPQ9BX97 442 aa23.83■■□□□ 1.4
USF3-203ENST00000491165 RASSF9O75901 435 aa23.82■■□□□ 1.4
USF3-203ENST00000491165 BRD2P25440 801 aaKnown RBP23.82■■□□□ 1.4
USF3-203ENST00000491165 GNA15P30679 374 aa23.82■■□□□ 1.4
USF3-203ENST00000491165 LACTB2Q53H82 288 aaPredicted RBP23.82■■□□□ 1.4
USF3-203ENST00000491165 OR10T2Q8NGX3 314 aa23.82■■□□□ 1.4
USF3-203ENST00000491165 EPS8L3Q8TE67 593 aaKnown RBP23.82■■□□□ 1.4
USF3-203ENST00000491165 C17orf80Q9BSJ5 609 aa23.82■■□□□ 1.4
USF3-203ENST00000491165 NT5C1AQ9BXI3 368 aa23.82■■□□□ 1.4
USF3-203ENST00000491165 LRRC19Q9H756 370 aa23.82■■□□□ 1.4
USF3-203ENST00000491165 FGFR3P22607 806 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 KCNJ1P48048 391 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 YWHAEP62258 255 aaKnown RBP23.81■■□□□ 1.4
USF3-203ENST00000491165 CALCOCO2Q13137 446 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 PPP1R7Q15435 360 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 UBAP2Q5T6F2 1119 aaKnown RBP23.81■■□□□ 1.4
USF3-203ENST00000491165 TMEM86AQ8N2M4 240 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 PBX4Q9BYU1 374 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 SLC40A1Q9NP59 571 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 RASGRF2O14827 1237 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 YWHAHQ04917 246 aaPredicted RBP23.81■■□□□ 1.4
USF3-203ENST00000491165 VARS2Q5ST30 1063 aaKnown RBP23.81■■□□□ 1.4
USF3-203ENST00000491165 OVOS1Q6IE37 1185 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 ACAD10Q6JQN1 1059 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 CCDC197Q8NCU1 140 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 UHMK1Q8TAS1 419 aaKnown RBP23.81■■□□□ 1.4
USF3-203ENST00000491165 SNX25Q9H3E2 840 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 KLC4Q9NSK0 619 aa23.81■■□□□ 1.4
USF3-203ENST00000491165 INTS9Q9NV88 658 aaKnown RBP23.81■■□□□ 1.4
USF3-203ENST00000491165 TYMPP19971 482 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 SPRED3Q2MJR0 410 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 UNC93AQ86WB7 457 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 KLHL23Q8NBE8 558 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 ZNF606Q8WXB4 792 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 SLCO2A1Q92959 643 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 TMEM169Q96HH4 297 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 KDM4CQ9H3R0 1056 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 CRTAC1Q9NQ79 661 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 SPG21Q9NZD8 308 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 FGF18O76093 207 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 PAX3P23760 479 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 RSPO2Q6UXX9 243 aaPredicted RBP23.8■■□□□ 1.4
USF3-203ENST00000491165 ANKS4BQ8N8V4 417 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 CCT6BQ92526 530 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 FAM124BQ9H5Z6 455 aaPredicted RBP23.8■■□□□ 1.4
USF3-203ENST00000491165 FAM49BQ9NUQ9 324 aa23.8■■□□□ 1.4
USF3-203ENST00000491165 SYN3O14994 580 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 BMP8BP34820 402 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 SLCO1A2P46721 670 aa23.79■■□□□ 1.4
USF3-203ENST00000491165 LHX1P48742 406 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms