RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 CRELD1Q96HD1 420 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 ANKRD36BP1Q96IX9 119 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 EPSTI1Q96J88 318 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 C8orf48Q96LL4 319 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 SLITRK1Q96PX8 696 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 CCSER2Q9H7U1 834 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 CD248Q9HCU0 757 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 INTS13Q9NVM9 706 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 SH3BP1Q9Y3L3 701 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 A0A1W2PQD8 194 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 KALRNO60229 2985 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 GARTP22102 1010 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 NTSR1P30989 418 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 LONP1P36776 959 aaKnown RBP16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 HNRNPDQ14103 355 aaKnown RBP16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 SLCO6A1Q86UG4 719 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 KIAA1958Q8N8K9 716 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 FBXO32Q969P5 355 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 IL21RQ9HBE5 538 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 DNAJC17Q9NVM6 304 aaKnown RBP16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 CACNA2D2Q9NY47 1150 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 EHD2Q9NZN4 543 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 TBC1D14Q9P2M4 693 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 KIF3AQ9Y496 699 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 ACACAQ13085 2346 aa16.29■□□□□ 0.2
SCAMP3-208ENST00000490999 E2F8A0AVK6 867 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 PRPF6O94906 941 aaKnown RBP16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 TNNC2P02585 160 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 IDEP14735 1019 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 GJB2P29033 226 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 PPP3CCP48454 512 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 GRAMD4Q6IC98 578 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 TOGARAM2Q6ZUX3 1019 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 DPH6Q7L8W6 267 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 GPD1LQ8N335 351 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 ZCCHC9Q8N567 271 aaKnown RBP16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 OR6B3Q8NGW1 331 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 DNAJC19Q96DA6 116 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 CEP295NLQ96MC4 621 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 ELOVL4Q9GZR5 314 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 SNX25Q9H3E2 840 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 SPHK2Q9NRA0 654 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 SEL1LQ9UBV2 794 aa16.28■□□□□ 0.2
SCAMP3-208ENST00000490999 MYOFQ9NZM1 2061 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 MEI4A8MW99 385 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 PRRT4C9JH25 899 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 NEDD8-MDP1E9PL57 170 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 CBFA2T3O75081 653 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 NDUFS2O75306 463 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 ZNF217O75362 1048 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 GAP43P17677 238 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 YWHAQP27348 245 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 SLC14A1Q13336 389 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 CACUL1Q86Y37 369 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 SCAMP5Q8TAC9 235 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 SETD7Q8WTS6 366 aaKnown RBP16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 BHMTQ93088 406 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 MRGPRX1Q96LB2 322 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 B3GNT5Q9BYG0 378 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 GMIPQ9P107 970 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 CHORDC1Q9UHD1 332 aaPredicted RBP16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 PCOLCE2Q9UKZ9 415 aa16.27■□□□□ 0.2
SCAMP3-208ENST00000490999 GOLGA8CPA6NN73 597 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 PTPN1P18031 435 aaKnown RBP16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 GNL1P36915 607 aaPredicted RBP16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 PGFP49763 221 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 SLC5A3P53794 718 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 HECTD3Q5T447 861 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 ZNF419Q96HQ0 510 aaPredicted RBP16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 GABRG3Q99928 467 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 NACA2Q9H009 215 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 MIR1-1HGQ9H1L0 117 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 SUSD2Q9UGT4 822 aa16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 APOBEC2Q9Y235 224 aaKnown RBP16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 FNDC3AQ9Y2H6 1198 aaKnown RBP16.26■□□□□ 0.19
SCAMP3-208ENST00000490999 EIF4E1BA6NMX2 242 aaKnown RBP16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 WASH3PC4AMC7 463 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 ZBTB24O43167 697 aaPredicted RBP16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 DLATP10515 647 aaKnown RBP16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 GNSP15586 552 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 SYCP2LQ5T4T6 812 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 TPGS1Q6ZTW0 290 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 FAM35AQ86V20 835 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 NUP93Q8N1F7 819 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 B3GALNT2Q8NCR0 500 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 PDZD8Q8NEN9 1154 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 KCNV2Q8TDN2 545 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 SCFD1Q8WVM8 642 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 HPS3Q969F9 1004 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 COL26A1Q96A83 441 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 OTUB2Q96DC9 234 aa16.25■□□□□ 0.19
SCAMP3-208ENST00000490999 FAM124BQ9H5Z6 455 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms