RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ATICP31939 592 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 SNRPFP62306 86 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 NEDD8Q15843 81 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 FAM47CQ5HY64 1035 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 EFHC2Q5JST6 749 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 LAYNQ6UX15 382 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 FAM71AQ8IYT1 594 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 MIPEPQ99797 713 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 VPS33BQ9H267 617 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 SEMA6AQ9H2E6 1030 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PCDH18Q9HCL0 1135 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 ZNF219Q9P2Y4 722 aaPredicted RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 DRG1Q9Y295 367 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 COQ6Q9Y2Z9 468 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 MEGF6O75095 1541 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 APOL1O14791 398 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 TGFB1I1O43294 461 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 SRP72O76094 671 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 RAB15P59190 212 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 TSPY1Q01534 308 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 ARSHQ5FYA8 562 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 KCNT1Q5JUK3 1230 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 ZNF618Q5T7W0 954 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PCDHB18PQ96TA0 734 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 EPB41L4BQ9H329 900 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PNPLA3Q9NST1 481 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 CDH22Q9UJ99 828 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 F5H6K3 240 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 H0Y626 953 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 GOLGA8TH3BQL2 631 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 ATP9BO43861 1147 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 TRIM16O95361 564 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 EIF2AK2P19525 551 aaKnown RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 TFE3P19532 575 aaPredicted RBP11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 BMT2Q1RMZ1 405 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 TMC5Q6UXY8 1006 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 ANKS1BQ7Z6G8 1248 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 CHSY1Q86X52 802 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PDSS2Q86YH6 399 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 SLCO2A1Q92959 643 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 PANX3Q96QZ0 392 aa11.68□□□□□ -0.54
CRNKL1-204ENST00000490910 H3BNX3 289 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 CNOT3O75175 753 aaKnown RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 COX4I1P13073 169 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 CPA3P15088 417 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 NELFEP18615 380 aaKnown RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ACTR2P61160 394 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 HYIQ5T013 277 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 FAM102AQ5T9C2 384 aaPredicted RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 C7orf26Q96N11 449 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 C1orf50Q9BV19 199 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 BRD8Q9H0E9 1235 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 MRGBPQ9NV56 204 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 BFARQ9NZS9 450 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 BARX2Q9UMQ3 279 aaPredicted RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 SQORQ9Y6N5 450 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 SAC3D1A6NKF1 404 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ALBP02768 609 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 JAK1P23458 1154 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 CNTFP26441 200 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 DLG4P78352 724 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 SEL1L3Q68CR1 1132 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ZBTB46Q86UZ6 589 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ZSCAN18Q8TBC5 510 aaPredicted RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 RBAKQ9NYW8 714 aaPredicted RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ITGA11Q9UKX5 1188 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 IVNS1ABPQ9Y6Y0 642 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 CLASP2O75122 1294 aaKnown RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 SPRP35270 261 aaPredicted RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 PPP4CP60510 307 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 C6orf52Q5T4I8 152 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ADGRD1Q6QNK2 874 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 KYAT3Q6YP21 454 aaKnown RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ARCQ7LC44 396 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ZNF354CQ86Y25 554 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 THNSL1Q8IYQ7 743 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 PCYOX1LQ8NBM8 494 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 TBCCD1Q9NVR7 557 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
CRNKL1-204ENST00000490910 A0A0J9YVX5 310 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 RBM47A0AV96 593 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 T-ENOLP0DO92 83 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CETPP11597 493 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 MAPK10P53779 464 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SFT2D3Q587I9 215 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SH3D19Q5HYK7 790 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ARHGEF16Q5VV41 709 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SV2AQ7L0J3 742 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ERI1Q8IV48 349 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 ZCCHC7Q8N3Z6 543 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 MCPH1Q8NEM0 835 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 DIS3LQ8TF46 1054 aaKnown RBP11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 SHC3Q92529 594 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 CEP19Q96LK0 163 aa11.66□□□□□ -0.54
CRNKL1-204ENST00000490910 BAG5Q9UL15 447 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms