RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 MRPL49Q13405 166 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CUL4BQ13620 913 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 IRF3Q14653 427 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 RALGPS1Q5JS13 557 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 COLEC12Q5KU26 742 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 NUGGCQ68CJ6 796 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PRR23CQ6ZRP0 262 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 UNC13DQ70J99 1090 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ZNF619Q8N2I2 560 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 FIBINQ8TAL6 211 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 LTV1Q96GA3 475 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 NACC1Q96RE7 527 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 NUDT16L1Q9BRJ7 211 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 TDP1Q9NUW8 608 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SEL1LQ9UBV2 794 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PADI1Q9ULC6 663 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PALD1Q9ULE6 856 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 LMTK2Q8IWU2 1503 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CEP152O94986 1710 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 KCNK3O14649 394 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CTIFO43310 598 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 OLFM2O95897 454 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 KRT8P05787 483 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 JUPP14923 745 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 HOXA11P31270 313 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 NLRP5P59047 1200 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 DLG4P78352 724 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MESP2Q0VG99 397 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 STK4Q13043 487 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SMAD4Q13485 552 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PRAMEF14Q5SWL7 426 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MANEALQ5VSG8 457 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 DCAF12L1Q5VU92 463 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 TRIM72Q6ZMU5 477 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SDCCAG8Q86SQ7 713 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CEP70Q8NHQ1 597 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 UBE2FQ969M7 185 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MRPL38Q96DV4 380 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 C7orf25Q9BPX7 421 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SLC46A2Q9BY10 475 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PDE7BQ9NP56 450 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 LANCL2Q9NS86 450 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 BEX4Q9NWD9 120 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MID2Q9UJV3 735 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ZDHHC9Q9Y397 364 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PCDHA13Q9Y5I0 950 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SPATA31A1Q5TZJ5 1347 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CNTNAP5Q8WYK1 1306 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 TMEM265A0A087WTH1 108 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 FAM90A8PA6NJQ4 464 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ADM5C9JUS6 153 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 E7EVH7 732 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 E9PLN8 166 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 GTPBP1O00178 669 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PODXLO00592 558 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 LDLRAD4O15165 306 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 VILLO15195 856 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MED26O95402 600 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 HNRNPA1P09651 372 aaKnown RBP eCLIP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 H2AFB1P0C5Y9 115 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 H2AFB2P0C5Z0 115 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 FAM90A13PP0C7W8 464 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 FAM90A24PP0C7X0 464 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PECAM1P16284 738 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PPP5CP53041 499 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SNRPNP63162 240 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MEP1BQ16820 701 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ZNF628Q5EBL2 1059 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ERMARDQ5T6L9 678 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ATG16L1Q676U5 607 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 FAM83HQ6ZRV2 1179 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 GALNTL5Q7Z4T8 443 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CREG2Q8IUH2 290 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SPPL2CQ8IUH8 684 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 AVL9Q8NBF6 648 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SPSB4Q96A44 273 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MASTLQ96GX5 879 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 PWWP2AQ96N64 755 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 VKORC1Q9BQB6 163 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MLPHQ9BV36 600 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SYNCQ9H7C4 482 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 BRD9Q9H8M2 597 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 HESX1Q9UBX0 185 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 EXO1Q9UQ84 846 aaKnown RBP3.26□□□□□ -1.89
UBXN4-208ENST00000490163 SNX13Q9Y5W8 968 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 AGLP35573 1532 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 ARHGEF12Q9NZN5 1544 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 CAMSAP2Q08AD1 1489 aa3.26□□□□□ -1.89
UBXN4-208ENST00000490163 MYBBP1AQ9BQG0 1328 aaKnown RBP3.25□□□□□ -1.89
UBXN4-208ENST00000490163 PABPN1LA6NDY0 278 aaKnown RBP3.25□□□□□ -1.89
UBXN4-208ENST00000490163 NRP1O14786 923 aa3.25□□□□□ -1.89
UBXN4-208ENST00000490163 PAGE4O60829 102 aa3.25□□□□□ -1.89
UBXN4-208ENST00000490163 TSPAN9O75954 239 aa3.25□□□□□ -1.89
UBXN4-208ENST00000490163 NDST3O95803 873 aa3.25□□□□□ -1.89
UBXN4-208ENST00000490163 C1SP09871 688 aa3.25□□□□□ -1.89
UBXN4-208ENST00000490163 LAG3P18627 525 aa3.25□□□□□ -1.89
UBXN4-208ENST00000490163 DDCP20711 480 aa3.25□□□□□ -1.89
UBXN4-208ENST00000490163 NNMTP40261 264 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms