RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 BBS7Q8IWZ6 715 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 C12orf56Q8IXR9 622 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 PGBD3Q8N328 593 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 WBP2Q969T9 261 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 ZNF396Q96N95 335 aaPredicted RBP16.83■□□□□ 0.28
PLOD3-216ENST00000489927 SDCBP2Q9H190 292 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 DMAP1Q9NPF5 467 aaPredicted RBP16.83■□□□□ 0.28
PLOD3-216ENST00000489927 IL37Q9NZH6 218 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 GMIPQ9P107 970 aa16.83■□□□□ 0.28
PLOD3-216ENST00000489927 RALYQ9UKM9 306 aaKnown RBP16.83■□□□□ 0.28
PLOD3-216ENST00000489927 ZZEF1O43149 2961 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 ATXN2Q99700 1313 aaKnown RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 FAM92AA1XBS5 289 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 POLR2DO15514 142 aaKnown RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 HOXC11O43248 304 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 TULP3O75386 442 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 YEATS4O95619 227 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 TOP3BO95985 862 aaKnown RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 ZDHHC11BP0C7U3 371 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 MAPK8P45983 427 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 PGFP49763 221 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 TUBP50607 506 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 LMAN2Q12907 356 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 KNOP1Q1ED39 458 aaKnown RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 ZNF667Q5HYK9 610 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 SPDYCQ5MJ68 293 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 BTBD8Q5XKL5 378 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 SCARA5Q6ZMJ2 495 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 TMEM25Q86YD3 366 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 FUKQ8N0W3 1084 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 DEFB124Q8NES8 71 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 SMARCD1Q96GM5 515 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 TNIP3Q96KP6 325 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 NUSAP1Q9BXS6 441 aaKnown RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 MAGEF1Q9HAY2 307 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 SPHK2Q9NRA0 654 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 KRT82Q9NSB4 513 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 CGNQ9P2M7 1197 aaKnown RBP16.82■□□□□ 0.28
PLOD3-216ENST00000489927 DEC1Q9P2X7 70 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 SPEGQ15772 3267 aa16.82■□□□□ 0.28
PLOD3-216ENST00000489927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-216ENST00000489927 LRRIQ3A6PVS8 624 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-216ENST00000489927 TRIM24O15164 1050 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-216ENST00000489927 IRF1P10914 325 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 ENGP17813 658 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 CLDN10P78369 228 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 CUL4BQ13620 913 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 NCOA4Q13772 614 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 BYSLQ13895 437 aaKnown RBP16.81■□□□□ 0.28
PLOD3-216ENST00000489927 ANO4Q32M45 955 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 C10orf76Q5T2E6 689 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 LYSMD4Q5XG99 296 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 ACOT1Q86TX2 421 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 ZNF513Q8N8E2 541 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-216ENST00000489927 TERB1Q8NA31 727 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 KCNV2Q8TDN2 545 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 PARD3BQ8TEW8 1205 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 NACA2Q9H009 215 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 PILRBQ9UKJ0 227 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 HCN2Q9UL51 889 aa16.81■□□□□ 0.28
PLOD3-216ENST00000489927 TNRC6BQ9UPQ9 1833 aaKnown RBP16.8■□□□□ 0.28
PLOD3-216ENST00000489927 PVALEFA0A1B0GWK0 134 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 K7ELQ4 463 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-216ENST00000489927 AP1G2O75843 785 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 BEST1O76090 585 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 VNN1O95497 513 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 C4BPAP04003 597 aaKnown RBP16.8■□□□□ 0.28
PLOD3-216ENST00000489927 CCDC130P13994 396 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 GABRG2P18507 467 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 ITPKAP23677 461 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 AFMP43652 599 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 AP3M2P53677 418 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 ORC1Q13415 861 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 PEAR1Q5VY43 1037 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-216ENST00000489927 SLC23A3Q6PIS1 610 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 TRMT11Q7Z4G4 463 aaKnown RBP16.8■□□□□ 0.28
PLOD3-216ENST00000489927 MIB1Q86YT6 1006 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 ZMIZ2Q8NF64 920 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 SMOQ99835 787 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 ADAM33Q9BZ11 813 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 COMMD8Q9NX08 183 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 HMGXB4Q9UGU5 601 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 MYOFQ9NZM1 2061 aa16.8■□□□□ 0.28
PLOD3-216ENST00000489927 GREM1O60565 184 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 TLR5O60602 858 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 HOXB2P14652 356 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 WASP42768 502 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 DLG4P78352 724 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 RPL6Q02878 288 aaKnown RBP16.79■□□□□ 0.28
PLOD3-216ENST00000489927 PREPLQ4J6C6 727 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-216ENST00000489927 FOXD4L5Q5VV16 416 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-216ENST00000489927 DEFB119Q8N690 84 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 GOLGA5Q8TBA6 731 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 SLC2A14Q8TDB8 520 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 FOXD4L4Q8WXT5 416 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-216ENST00000489927 SCNM1Q9BWG6 230 aa16.79■□□□□ 0.28
PLOD3-216ENST00000489927 TMEM121BQ9BXQ6 578 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-216ENST00000489927 CSNK1G1Q9HCP0 422 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms