RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 UIMC1Q96RL1 719 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 RBM15Q96T37 977 aaKnown RBP eCLIP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ZSWIM1Q9BR11 485 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 INO80BQ9C086 356 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 MOV10Q9HCE1 1003 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 FBXO6Q9NRD1 293 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 DNAJC17Q9NVM6 304 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 NCKIPSDQ9NZQ3 722 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ARPP21Q9UBL0 812 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC24A2Q9UI40 661 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 EXOC7Q9UPT5 735 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SORCS3Q9UPU3 1222 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ERGIC3Q9Y282 383 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 PTPN22Q9Y2R2 807 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 HEMK1Q9Y5R4 338 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC30A1Q9Y6M5 507 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF532Q9HCE3 1301 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 CCDC194A0A1B0GVG4 234 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 EXOC1LA0A1B0GW35 172 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 TCRBV5S4A2TA0A5A2 114 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ARHGAP42A6NI28 874 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 GSG1L2A8MUP6 293 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 FSCN2O14926 492 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 TEX28O15482 410 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SIAH2O43255 324 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 IDH3BO43837 385 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 RSL1D1O76021 490 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 DDAH1O94760 285 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 BMP10O95393 424 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 PLEKHA8P1O95397 391 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ENO1P06733 434 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 MYL2P10916 166 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ACTN1P12814 892 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 P4HA1P13674 534 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 GCAP28676 217 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 CPOXP36551 454 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 STAT1P42224 750 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 MAGEA4P43358 317 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 KCNJ1P48048 391 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 CPA2P48052 419 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SMCPP49901 116 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ESRRGP62508 458 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 DLG4P78352 724 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 KRT17Q04695 432 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 PDE1CQ14123 709 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC15A2Q16348 729 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 EDRF1Q3B7T1 1238 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ZBED5Q49AG3 693 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ITPRIPL1Q6GPH6 555 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 CCSAPQ6IQ19 270 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 FASTKD5Q7L8L6 764 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 FRMD5Q7Z6J6 570 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 KBTBD6Q86V97 674 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 NLRP10Q86W26 655 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 CHSY1Q86X52 802 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 DNAAF5Q86Y56 855 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 FAM20CQ8IXL6 584 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ZC3H3Q8IXZ2 948 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF34Q8IZ26 560 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC25A41Q8N5S1 370 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 CPSF7Q8N684 471 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 TERB1Q8NA31 727 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 GOLM1Q8NBJ4 401 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 MINDY2Q8NBR6 621 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 GSTCDQ8NEC7 633 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 PDZD8Q8NEN9 1154 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 LILRB4Q8NHJ6 448 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SNX29Q8TEQ0 813 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 RPGRQ92834 1020 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 DCUN1D1Q96GG9 259 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 MAELQ96JY0 434 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 LRGUKQ96M69 825 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 FERMT1Q9BQL6 677 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 PLVAPQ9BX97 442 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 NMUR2Q9GZQ4 415 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 LIN28AQ9H9Z2 209 aaKnown RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 EPB41L4AQ9HCS5 686 aaPredicted RBP4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 CD209Q9NNX6 404 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 HOXC10Q9NYD6 342 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ASIC3Q9UHC3 531 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 APPL1Q9UKG1 709 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 SOX13Q9UN79 622 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 TBX22Q9Y458 520 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 AP4B1Q9Y6B7 739 aa4.95□□□□□ -1.62
SNRNP40-206ENST00000489853 ATAD5Q96QE3 1844 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 GSTTP1A0A1W2PQM5 241 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 KRBA1A5PL33 1030 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 H0YJX3 145 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 MEN1O00255 615 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 IRS4O14654 1257 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 KLF11O14901 512 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 RGS13O14921 159 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC22A1O15245 554 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 CAPNS1P04632 268 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 ENO2P09104 434 aaPredicted RBP4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 ALOX5P09917 674 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 ATF2P15336 505 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 RAG1P15918 1043 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC9A1P19634 815 aa4.94□□□□□ -1.62
SNRNP40-206ENST00000489853 PRKACBP22694 351 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms