RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 STAU1O95793 577 aaKnown RBP10.24□□□□□ -0.77
NOD1-208ENST00000489614 PGK1P00558 417 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 INHAP05111 366 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 CDK4P11802 303 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 CCNB1P14635 433 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 AXLP30530 894 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 EIF4A3P38919 411 aaKnown RBP10.24□□□□□ -0.77
NOD1-208ENST00000489614 GRM5P41594 1212 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 VPS41P49754 854 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 CDK7P50613 346 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 AP3M2P53677 418 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 GFPT1Q06210 699 aaPredicted RBP10.24□□□□□ -0.77
NOD1-208ENST00000489614 MTMR3Q13615 1198 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 SNX17Q15036 470 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 GJB7Q6PEY0 223 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 PACS1Q6VY07 963 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 TMEM192Q8IY95 271 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 ANKLE1Q8NAG6 615 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 CASP10Q92851 521 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 VRTNQ9H8Y1 702 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 KCNK9Q9NPC2 374 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 TRPV5Q9NQA5 729 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 TXLNGQ9NUQ3 528 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 MOXD2PA6NHM9 499 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 SERPING1P05155 500 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 RPLP2P05387 115 aaKnown RBP10.24□□□□□ -0.77
NOD1-208ENST00000489614 ASGR1P07306 291 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 KRT13P13646 458 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 ACO1P21399 889 aaKnown RBP10.24□□□□□ -0.77
NOD1-208ENST00000489614 KIF11P52732 1056 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 KYAT1Q16773 422 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 TAF2Q6P1X5 1199 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 DSTYKQ6XUX3 929 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 ECHDC2Q86YB7 292 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 RSPH1Q8WYR4 309 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 SHC3Q92529 594 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 NLRP4Q96MN2 994 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 NOX5Q96PH1 765 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 CELF4Q9BZC1 486 aaKnown RBP10.24□□□□□ -0.77
NOD1-208ENST00000489614 GOLPH3Q9H4A6 298 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 EURLQ9NYK6 297 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 PTPN22Q9Y2R2 807 aa10.24□□□□□ -0.77
NOD1-208ENST00000489614 KCNK3O14649 394 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 CABYRO75952 493 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 CYP2C9P11712 490 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 IDO1P14902 403 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 CREB1P16220 341 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 GCLMP48507 274 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 TRPC1P48995 793 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 ACOT2P49753 483 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 POLR2FP61218 127 aaKnown RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 NAA20P61599 178 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 PDE1CQ14123 709 aaPredicted RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 PPP1R2P3Q6NXS1 205 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 FAM71AQ8IYT1 594 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 TAS1R2Q8TE23 839 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 ZNF184Q99676 751 aaPredicted RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 NUP85Q9BW27 656 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 XYLT2Q9H1B5 865 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 MMRN2Q9H8L6 949 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 TUBA8Q9NY65 449 aaPredicted RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 RBAKQ9NYW8 714 aaPredicted RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 PTCH2Q9Y6C5 1203 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 BTNL10A8MVZ5 291 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 CLDN3O15551 220 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 CHRNA1P02708 482 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 MXI1P50539 228 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 ZNF132P52740 706 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 GCNT1Q02742 428 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 DSC3Q14574 896 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 TCEAL1Q15170 157 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 LIMS2Q7Z4I7 341 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 PEX5LQ8IYB4 626 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 ST13P4Q8IZP2 240 aaPredicted RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 AGGF1Q8N302 714 aaeCLIP10.23□□□□□ -0.77
NOD1-208ENST00000489614 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 OR5B17Q8NGF7 314 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 DDX1Q92499 740 aaKnown RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 APOBEC3GQ9HC16 384 aaKnown RBP10.23□□□□□ -0.77
NOD1-208ENST00000489614 HESX1Q9UBX0 185 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 DERAQ9Y315 318 aa10.23□□□□□ -0.77
NOD1-208ENST00000489614 IL18RAPO95256 599 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 OAS1P00973 400 aaKnown RBP10.22□□□□□ -0.77
NOD1-208ENST00000489614 C6orf222P0C671 652 aaPredicted RBP10.22□□□□□ -0.77
NOD1-208ENST00000489614 SOX5P35711 763 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 ACLYP53396 1101 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 PDE1BQ01064 536 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 OCRLQ01968 901 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 DCTN2Q13561 401 aaKnown RBP10.22□□□□□ -0.77
NOD1-208ENST00000489614 CUL1Q13616 776 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 CNGA2Q16280 664 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 SLC10A6Q3KNW5 377 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 DCAF4L1Q3SXM0 396 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 UBAP2Q5T6F2 1119 aaKnown RBP10.22□□□□□ -0.77
NOD1-208ENST00000489614 CXCL17Q6UXB2 119 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 RDH13Q8NBN7 331 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.22□□□□□ -0.77
NOD1-208ENST00000489614 DNAJB3Q8WWF6 145 aa10.22□□□□□ -0.77
NOD1-208ENST00000489614 SLC7A5P2Q9GIP4 190 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms