RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 HFE2Q6ZVN8 426 aa22.65■■□□□ 1.22
SMC4-221ENST00000489573 RSRC2Q7L4I2 434 aaKnown RBP22.65■■□□□ 1.22
SMC4-221ENST00000489573 BHLHA9Q7RTU4 235 aa22.65■■□□□ 1.22
SMC4-221ENST00000489573 EXD1Q8NHP7 514 aa22.65■■□□□ 1.22
SMC4-221ENST00000489573 CLSTN3Q9BQT9 956 aa22.65■■□□□ 1.22
SMC4-221ENST00000489573 C11orf84Q9BUA3 381 aaPredicted RBP22.65■■□□□ 1.22
SMC4-221ENST00000489573 NGRNQ9NPE2 291 aaKnown RBP22.65■■□□□ 1.22
SMC4-221ENST00000489573 LTFP02788 710 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 KRT1P04264 644 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 NOS2P35228 1153 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 TUBB4BP68371 445 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 DDR2Q16832 855 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 LONRF2Q1L5Z9 754 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 MGAT5BQ3V5L5 792 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 ZFYVE27Q5T4F4 411 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 TXNRD3NBQ6F5E7 133 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 GPR65Q8IYL9 337 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 SCAMP5Q8TAC9 235 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 UBXN4Q92575 508 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 SEPT5Q99719 369 aaPredicted RBP22.64■■□□□ 1.22
SMC4-221ENST00000489573 ZWILCHQ9H900 591 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.64■■□□□ 1.227e-44■■■■■ 137.4
SMC4-221ENST00000489573 STAP1Q9ULZ2 295 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 USP18Q9UMW8 372 aa22.64■■□□□ 1.22
SMC4-221ENST00000489573 V9GYY5 206 aaPredicted RBP22.64■■□□□ 1.22
SMC4-221ENST00000489573 LCHNA4D1U4 455 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 ZRANB2O95218 330 aaKnown RBP eCLIP22.63■■□□□ 1.21
SMC4-221ENST00000489573 TRUB2O95900 331 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 IL1R2P27930 398 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 SLC25A52Q3SY17 297 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 DCAF6Q58WW2 860 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 SDHAF4Q5VUM1 108 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 NUP93Q8N1F7 819 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 CENPIQ92674 756 aaPredicted RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 RBM41Q96IZ5 413 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 TBCBQ99426 244 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 TRIM62Q9BVG3 475 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 ZBP1Q9H171 429 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 CRISPLD1Q9H336 500 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 MRPL17Q9NRX2 175 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 KLHL11Q9NVR0 708 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 PCSK1NQ9UHG2 260 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 SLC27A5Q9Y2P5 690 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 NR2E3Q9Y5X4 410 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 CAPN9O14815 690 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 PRPSAP2O60256 369 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 SULT1E1P49888 294 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 RPL10AP62906 217 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 CREMQ03060 361 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 IFRD2Q12894 506 aaPredicted RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 DUSP4Q13115 394 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 SMC1AQ14683 1233 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 ATP13A4Q4VNC1 1196 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 RAB6CQ53S08 254 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 STRADAQ7RTN6 431 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 CCDC50Q8IVM0 306 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 RCOR2Q8IZ40 523 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 KLHL23Q8NBE8 558 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 NOA1Q8NC60 698 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 RAB6CQ9H0N0 254 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 FBXO44Q9H4M3 255 aa22.63■■□□□ 1.21
SMC4-221ENST00000489573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.63■■□□□ 1.21
SMC4-221ENST00000489573 RBM12Q9NTZ6 932 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 AFF4Q9UHB7 1163 aaKnown RBP22.63■■□□□ 1.21
SMC4-221ENST00000489573 PDE4DIPQ5VU43 2346 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 FYNP06241 537 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 TFE3P19532 575 aaPredicted RBP22.62■■□□□ 1.21
SMC4-221ENST00000489573 DNAJB2P25686 324 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 HDAC4P56524 1084 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 ODF2Q5BJF6 829 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 TPGS2Q68CL5 300 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 SLC13A5Q86YT5 568 aaPredicted RBP22.62■■□□□ 1.21
SMC4-221ENST00000489573 NT5C3BQ969T7 300 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 SPATA17Q96L03 361 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 PEBP4Q96S96 227 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 NPY6RQ99463 290 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 SSX2IPQ9Y2D8 614 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 RWDD3Q9Y3V2 267 aa22.62■■□□□ 1.21
SMC4-221ENST00000489573 KRIT1O00522 736 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 SOAT2O75908 522 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 CTNNB1P35222 781 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 CETN2P41208 172 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 ERCC6LQ2NKX8 1250 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 SMTNL2Q2TAL5 461 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 SYPL2Q5VXT5 272 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 BEND5Q7L4P6 421 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 MMGT1Q8N4V1 131 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 AUTS2Q8WXX7 1259 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 RNF25Q96BH1 459 aaPredicted RBP22.61■■□□□ 1.21
SMC4-221ENST00000489573 SLITRK1Q96PX8 696 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 ADAM33Q9BZ11 813 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 RRN3Q9NYV6 651 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 FNIP2Q9P278 1114 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 HSFX1Q9UBD0 423 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 NAALADL1Q9UQQ1 740 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 SCML2Q9UQR0 700 aa22.61■■□□□ 1.21
SMC4-221ENST00000489573 ABLIM3O94929 683 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 RTN3O95197 1032 aaPredicted RBP22.6■■□□□ 1.21
SMC4-221ENST00000489573 CTSAP10619 480 aa22.6■■□□□ 1.21
SMC4-221ENST00000489573 NCAM1P13591 858 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms