RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CTHP32929 405 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 ZNF132P52740 706 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 ADKP55263 362 aaKnown RBP11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 FZD5Q13467 585 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 LRRC32Q14392 662 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 DRAP1Q14919 205 aaPredicted RBP11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 PDGFRLQ15198 375 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 ITPRIPL2Q3MIP1 535 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 WDR59Q6PJI9 974 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 FAM35AQ86V20 835 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 PPM1KQ8N3J5 372 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 WHAMMQ8TF30 809 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 IQCDQ96DY2 449 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 SMARCD1Q96GM5 515 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 ZFYVE19Q96K21 471 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 PCMTD1Q96MG8 357 aaPredicted RBP11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 SLITRK1Q96PX8 696 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 FAM83CQ9BQN1 747 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 MED10Q9BTT4 135 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 STK33Q9BYT3 514 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 CHRDQ9H2X0 955 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 CYP3A43Q9HB55 503 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 GKN1Q9NS71 199 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 GTSE1Q9NYZ3 720 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 HMGXB4Q9UGU5 601 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 CCL26Q9Y258 94 aa11.16□□□□□ -0.62
SCAMP4-208ENST00000489554 PRR23AA6NEV1 266 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 FOXN3O00409 490 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 CLDN5O00501 218 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 ZNF500O60304 480 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 RTN3O95197 1032 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 CHRNB1P11230 501 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 TCF3P15923 654 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 HDCP19113 662 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 KRT9P35527 623 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 SOX9P48436 509 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 NDST1P52848 882 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 CACNA2D1P54289 1103 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 USP46P62068 366 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 ZBED6P86452 979 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 AMPD2Q01433 879 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 TNK2Q07912 1038 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 INCA1Q0VD86 236 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 USP4Q13107 963 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 RUNX3Q13761 415 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 PPP2R5DQ14738 602 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 MTF1Q14872 753 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 MEA1Q16626 185 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 DGKKQ5KSL6 1271 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 HGSNATQ68CP4 663 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 CCDC186Q7Z3E2 898 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 IRF2BP2Q7Z5L9 587 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 ACOT1Q86TX2 421 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 FAM71AQ8IYT1 594 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 MAML2Q8IZL2 1156 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 NUP93Q8N1F7 819 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 CRYBG2Q8N1P7 616 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 ARL14EPQ8N8R7 260 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 PDZD8Q8NEN9 1154 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 OVCA2Q8WZ82 227 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 TWNKQ96RR1 684 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 SYT11Q9BT88 431 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 LMAN1LQ9HAT1 526 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 DMAP1Q9NPF5 467 aaPredicted RBP11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 ABHD10Q9NUJ1 306 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 MYO6Q9UM54 1294 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 ARHGAP26Q9UNA1 814 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 LUC7L2Q9Y383 392 aaKnown RBP11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 MIA3Q5JRA6 1907 aa11.15□□□□□ -0.62
SCAMP4-208ENST00000489554 F5P12259 2224 aa11.15□□□□□ -0.63
SCAMP4-208ENST00000489554 TICRRQ7Z2Z1 1910 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 C2orf78A6NCI8 922 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 ZNF840PA6NDX5 716 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 AKR1B15C9JRZ8 316 aaPredicted RBP11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 CILPO75339 1184 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 CALCAP01258 141 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 TBXAS1P24557 533 aaPredicted RBP11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 YWHAQP27348 245 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 SOX5P35711 763 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 CCR3P51677 355 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 MFAP3P55082 362 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 CSTF1Q05048 431 aaKnown RBP11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 TAF10Q12962 218 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 MTAPQ13126 283 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 ZNF77Q15935 545 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 ARHGAP44Q17R89 818 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 PAQR9Q6ZVX9 377 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 ENOSF1Q7L5Y1 443 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 ASCL5Q7RTU5 278 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 FUKQ8N0W3 1084 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 SYNPOQ8N3V7 929 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 CPA6Q8N4T0 437 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 TTC39CQ8N584 583 aa11.14□□□□□ -0.63
SCAMP4-208ENST00000489554 KIAA1958Q8N8K9 716 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms