RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ZXDBP98169 803 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 AMPD2Q01433 879 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 TNK2Q07912 1038 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 RUNX3Q13761 415 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 MEA1Q16626 185 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 KLHDC7AQ5VTJ3 777 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 PM20D1Q6GTS8 502 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 DPY19L2P1Q6NXN4 242 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 KLHDC10Q6PID8 442 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 RALGPS2Q86X27 583 aaPredicted RBP18.25■□□□□ 0.51
MDC1-206ENST00000489540 PJA1Q8NG27 643 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 FAM3CQ92520 227 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 HSFY1Q96LI6 401 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 FOXQ1Q9C009 403 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 LTB4R2Q9NPC1 389 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 SMPD4Q9NXE4 827 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 NAGPAQ9UK23 515 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 ZDBF2Q9HCK1 2354 aa18.25■□□□□ 0.51
MDC1-206ENST00000489540 BECN2A8MW95 431 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 M0QYV0 167 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 TULP2O00295 520 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 SLC9A3R1O14745 358 aaPredicted RBP18.24■□□□□ 0.51
MDC1-206ENST00000489540 RARGP13631 454 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 CD72P21854 359 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 GNA15P30679 374 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 IFNAR2P48551 515 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 COPB1P53618 953 aaKnown RBP18.24■□□□□ 0.51
MDC1-206ENST00000489540 PTK2Q05397 1052 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 UBXN2BQ14CS0 331 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 SCD5Q86SK9 330 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 AOPEPQ8N6M6 819 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 ZNF606Q8WXB4 792 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 SECISBP2LQ93073 1101 aaKnown RBP18.24■□□□□ 0.51
MDC1-206ENST00000489540 ATP2A3Q93084 1043 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 EBF3Q9H4W6 596 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 NMUR1Q9HB89 426 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 PLCB1Q9NQ66 1216 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 HPS4Q9NQG7 708 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.24■□□□□ 0.51
MDC1-206ENST00000489540 OSER1Q9NX31 292 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 CFAP97Q9P2B7 532 aa18.24■□□□□ 0.51
MDC1-206ENST00000489540 FOXN3O00409 490 aaPredicted RBP18.23■□□□□ 0.51
MDC1-206ENST00000489540 THAP12O43422 761 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 CALCAP01258 141 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 ZNF165P49910 485 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 BPIFB4P59827 614 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 NR1H3Q13133 447 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 TRIM68Q6AZZ1 485 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 PMF1Q6P1K2 205 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 SIX6OS1Q8N1H7 587 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 SCML4Q8N228 414 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 CPA6Q8N4T0 437 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 TTC8Q8TAM2 541 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 FUCA2Q9BTY2 467 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 LSM14BQ9BX40 385 aaKnown RBP18.23■□□□□ 0.51
MDC1-206ENST00000489540 ULBP1Q9BZM6 244 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 CNGB3Q9NQW8 809 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 TBC1D14Q9P2M4 693 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 DNMT3LQ9UJW3 386 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 WNT6Q9Y6F9 365 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 GREB1Q4ZG55 1949 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 TRIOO75962 3097 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 E2F8A0AVK6 867 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 SYCE3A1L190 88 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 SHISA7A6NL88 538 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 SPECC1L-ADORA2AF8WAN1 911 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 TBX18O95935 607 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 DCNP07585 359 aaKnown RBP18.23■□□□□ 0.51
MDC1-206ENST00000489540 ARSAP15289 507 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 UCHL3P15374 230 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 GPD2P43304 727 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 MAGEA9P43362 315 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 YWHAGP61981 247 aaKnown RBP eCLIP18.23■□□□□ 0.51
MDC1-206ENST00000489540 GOLGA8FQ08AF8 430 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 GOLGA8DPQ0D2H9 430 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 EML3Q32P44 896 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 FAM71AQ8IYT1 594 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 STK32AQ8WU08 396 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 ZFRQ96KR1 1074 aaKnown RBP18.23■□□□□ 0.51
MDC1-206ENST00000489540 KLF16Q9BXK1 252 aaPredicted RBP18.23■□□□□ 0.51
MDC1-206ENST00000489540 STK33Q9BYT3 514 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 HSD3B7Q9H2F3 369 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 LINC00597Q9H2U6 94 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 ECT2Q9H8V3 914 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 SH3BP1Q9Y3L3 701 aa18.23■□□□□ 0.51
MDC1-206ENST00000489540 MTF2Q9Y483 593 aaPredicted RBP18.23■□□□□ 0.51
MDC1-206ENST00000489540 LGALS16A8MUM7 142 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 GALR2O43603 387 aaPredicted RBP18.22■□□□□ 0.51
MDC1-206ENST00000489540 TARSP26639 723 aaKnown RBP18.22■□□□□ 0.51
MDC1-206ENST00000489540 CTHP32929 405 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 ACADSBP45954 432 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 SOX9P48436 509 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 ADIGQ0VDE8 80 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 RAPGEF1Q13905 1077 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 DRAP1Q14919 205 aaPredicted RBP18.22■□□□□ 0.51
MDC1-206ENST00000489540 C10orf120Q5SQS8 335 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 DHX40Q8IX18 779 aaKnown RBP18.22■□□□□ 0.51
MDC1-206ENST00000489540 CCDC105Q8IYK2 499 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 ADGRG2Q8IZP9 1017 aa18.22■□□□□ 0.51
MDC1-206ENST00000489540 DTWD2Q8NBA8 298 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms