RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 AP3M2P53677 418 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 DLG4P78352 724 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 GAD2Q05329 585 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 EOGTQ5NDL2 527 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 RESP18Q5W5W9 173 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 ACOT1Q86TX2 421 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 BBS7Q8IWZ6 715 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 FUKQ8N0W3 1084 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 FRMD1Q8N878 549 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 NAT16Q8N8M0 369 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 KIAA0895Q8NCT3 520 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 WBP2Q969T9 261 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 TNIP3Q96KP6 325 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 SMOQ99835 787 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 DUSP9Q99956 384 aaKnown RBP13.14□□□□□ -0.31
CPSF3-204ENST00000489403 KRT82Q9NSB4 513 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 DMAC2Q9NW81 257 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 MYH10P35580 1976 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 CNOT1A5YKK6 2376 aaKnown RBP13.14□□□□□ -0.31
CPSF3-204ENST00000489403 EPG5Q9HCE0 2579 aa13.14□□□□□ -0.31
CPSF3-204ENST00000489403 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 TCRBV21S2A2A0A5A6 115 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 F13A1P00488 732 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
CPSF3-204ENST00000489403 IRF1P10914 325 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 CCDC130P13994 396 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 ME1P48163 572 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 PGFP49763 221 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 IRX4P78413 519 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 STK4Q13043 487 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 ORC1Q13415 861 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 SLC9A9Q8IVB4 645 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 TMEFF1Q8IYR6 380 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 GOLGA5Q8TBA6 731 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 PIGKQ92643 395 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 SPACA7Q96KW9 195 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 KCTD10Q9H3F6 313 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 TMEM9BQ9NQ34 198 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 SPHK2Q9NRA0 654 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 COMMD8Q9NX08 183 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 BCCIPQ9P287 314 aaKnown RBP eCLIP13.13□□□□□ -0.31
CPSF3-204ENST00000489403 SERTAD1Q9UHV2 236 aa13.13□□□□□ -0.31
CPSF3-204ENST00000489403 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
CPSF3-204ENST00000489403 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
CPSF3-204ENST00000489403 MYO18AQ92614 2054 aaKnown RBP13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TBC1D3BA6NDS4 549 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TRIM24O15164 1050 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 ACTN4O43707 911 aaKnown RBP13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TLR5O60602 858 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TULP3O75386 442 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 PTGER3P43115 390 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 NDST1P52848 882 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 MAP3K7CLP57077 242 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 ZNF252P-AS1Q0IIN9 211 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 MAP7D1Q3KQU3 841 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 ZACNQ401N2 412 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 KMT5BQ4FZB7 885 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 SH3PXD2AQ5TCZ1 1133 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 BTBD8Q5XKL5 378 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 ARMCX6Q7L4S7 300 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 LPCAT2Q7L5N7 544 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TMEM25Q86YD3 366 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TMEM174Q8WUU8 243 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 SNX21Q969T3 373 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 TMEM74BQ9NUR3 256 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 EXOC1Q9NV70 894 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 EVLQ9UI08 416 aaPredicted RBP13.12□□□□□ -0.31
CPSF3-204ENST00000489403 HCN2Q9UL51 889 aa13.12□□□□□ -0.31
CPSF3-204ENST00000489403 ATXN2Q99700 1313 aaKnown RBP13.12□□□□□ -0.31
CPSF3-204ENST00000489403 CEP192Q8TEP8 1941 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 CFAP47Q6ZTR5 3102 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 GREM1O60565 184 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 P4HA1P13674 534 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 ASPAP45381 313 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 PKP1Q13835 747 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 SGSM1Q2NKQ1 1148 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 ANO4Q32M45 955 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 PREPLQ4J6C6 727 aaPredicted RBP13.11□□□□□ -0.31
CPSF3-204ENST00000489403 TRIM61Q5EBN2 209 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 C10orf76Q5T2E6 689 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 SPOPLQ6IQ16 392 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 SV2AQ7L0J3 742 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 GPRIN1Q7Z2K8 1008 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 MIB1Q86YT6 1006 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 CRYBG2Q8N1P7 616 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 PGBD3Q8N328 593 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 NACA2Q9H009 215 aa13.11□□□□□ -0.31
CPSF3-204ENST00000489403 FBXO44Q9H4M3 255 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms