RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 PCDHB4Q9Y5E5 795 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 USP3Q9Y6I4 520 aa25.3■■□□□ 1.64
PTPN18-213ENST00000489215 CACNA1IQ9P0X4 2223 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 RALAP11233 206 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 DRD1P21728 446 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 GJA4P35212 333 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 NRLP54845 237 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 ZXDBP98169 803 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 BST2Q10589 180 aaKnown RBP25.29■■□□□ 1.64
PTPN18-213ENST00000489215 MTAPQ13126 283 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 TMEM196Q5HYL7 178 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 CCSER2Q9H7U1 834 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 SMPD4Q9NXE4 827 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 CLIC5Q9NZA1 410 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 CFAP97Q9P2B7 532 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 TSPAN16Q9UKR8 245 aa25.29■■□□□ 1.64
PTPN18-213ENST00000489215 MYO16Q9Y6X6 1858 aa25.28■■□□□ 1.64
PTPN18-213ENST00000489215 GTPBP10A4D1E9 387 aaKnown RBP25.28■■□□□ 1.64
PTPN18-213ENST00000489215 XPO1O14980 1071 aaKnown RBP25.28■■□□□ 1.64
PTPN18-213ENST00000489215 MTIF2P46199 727 aaKnown RBP25.28■■□□□ 1.64
PTPN18-213ENST00000489215 CCINQ13939 588 aa25.28■■□□□ 1.64
PTPN18-213ENST00000489215 FBXO43Q4G163 708 aa25.28■■□□□ 1.64
PTPN18-213ENST00000489215 GPRIN1Q7Z2K8 1008 aa25.28■■□□□ 1.64
PTPN18-213ENST00000489215 PIGZQ86VD9 579 aa25.28■■□□□ 1.64
PTPN18-213ENST00000489215 ADGRG2Q8IZP9 1017 aa25.28■■□□□ 1.64
PTPN18-213ENST00000489215 P2RY13Q9BPV8 354 aa25.28■■□□□ 1.64
PTPN18-213ENST00000489215 OTOL1A6NHN0 477 aaPredicted RBP25.27■■□□□ 1.64
PTPN18-213ENST00000489215 ATG13O75143 517 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 SETSIPP0DME0 302 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 CXCL12P48061 93 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 CSTF1Q05048 431 aaKnown RBP25.27■■□□□ 1.64
PTPN18-213ENST00000489215 CNGA2Q16280 664 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 DPCR1Q3MIW9 517 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 RAB41Q5JT25 222 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 LCLAT1Q6UWP7 414 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 GBP6Q6ZN66 633 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 MAML2Q8IZL2 1156 aaPredicted RBP25.27■■□□□ 1.64
PTPN18-213ENST00000489215 NKD2Q969F2 451 aaPredicted RBP25.27■■□□□ 1.64
PTPN18-213ENST00000489215 INTS2Q9H0H0 1204 aaKnown RBP25.27■■□□□ 1.64
PTPN18-213ENST00000489215 LINC00597Q9H2U6 94 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 LRRC4Q9HBW1 653 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 PRMT8Q9NR22 394 aaPredicted RBP25.27■■□□□ 1.64
PTPN18-213ENST00000489215 DNMT3LQ9UJW3 386 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 NAGPAQ9UK23 515 aa25.27■■□□□ 1.64
PTPN18-213ENST00000489215 CYP26A1O43174 497 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 RARGP13631 454 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 PLA2G4AP47712 749 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 MFAP3P55082 362 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 GOLGA7BQ2TAP0 167 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 RRAGAQ7L523 313 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 CD101Q93033 1021 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 MED15Q96RN5 788 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.26■■□□□ 1.63
PTPN18-213ENST00000489215 LSM7Q9UK45 103 aaKnown RBP25.26■■□□□ 1.63
PTPN18-213ENST00000489215 PCDHGA2Q9Y5H1 932 aa25.26■■□□□ 1.63
PTPN18-213ENST00000489215 O00370 1275 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 MBD3O95983 291 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 ADH1CP00326 375 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 GALK1P51570 392 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 PDE4CQ08493 712 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 MAN2A1Q16706 1144 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 TTC30AQ86WT1 665 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 IRF2BP1Q8IU81 584 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 KCTD13Q8WZ19 329 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 ZFRQ96KR1 1074 aaKnown RBP25.25■■□□□ 1.63
PTPN18-213ENST00000489215 PHOX2BQ99453 314 aa25.25■■□□□ 1.63
PTPN18-213ENST00000489215 UBE2TQ9NPD8 197 aaPredicted RBP25.25■■□□□ 1.63
PTPN18-213ENST00000489215 A0A1W2PQH9 124 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 PAPSS2O95340 614 aaPredicted RBP25.24■■□□□ 1.63
PTPN18-213ENST00000489215 TKTL1P51854 596 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 EXOC3L4Q17RC7 722 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 PREPLQ4J6C6 727 aaPredicted RBP25.24■■□□□ 1.63
PTPN18-213ENST00000489215 C10orf120Q5SQS8 335 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 PM20D1Q6GTS8 502 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 HTR3DQ70Z44 454 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 RBBP8NLQ8NC74 664 aaPredicted RBP25.24■■□□□ 1.63
PTPN18-213ENST00000489215 ATRIPQ8WXE1 791 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 ZSCAN32Q9NX65 697 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 CNTN6Q9UQ52 1028 aa25.24■■□□□ 1.63
PTPN18-213ENST00000489215 PIEZO1Q92508 2521 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 ZBED1O96006 694 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 EIF2DP41214 584 aaKnown RBP25.23■■□□□ 1.63
PTPN18-213ENST00000489215 COG7P83436 770 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 DHCR24Q15392 516 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 TRIM65Q6PJ69 517 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 ARHGEF19Q8IW93 802 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 SCML4Q8N228 414 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 KLF16Q9BXK1 252 aaPredicted RBP25.23■■□□□ 1.63
PTPN18-213ENST00000489215 NMUR1Q9HB89 426 aa25.23■■□□□ 1.63
PTPN18-213ENST00000489215 RBM12Q9NTZ6 932 aaKnown RBP25.23■■□□□ 1.63
PTPN18-213ENST00000489215 MED7O43513 233 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 GFRA3O60609 400 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 GAD2Q05329 585 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 FSTL4Q6MZW2 842 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 RBM43Q6ZSC3 357 aaKnown RBP25.22■■□□□ 1.63
PTPN18-213ENST00000489215 SIX6OS1Q8N1H7 587 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 GPT2Q8TD30 523 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 KAT5Q92993 513 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 CNGB3Q9NQW8 809 aa25.22■■□□□ 1.63
PTPN18-213ENST00000489215 OLA1Q9NTK5 396 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms