RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 EP300Q09472 2414 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-232ENST00000489053 A0A1W2PQH9 124 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 TNFRSF10BO14763 440 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 ZBTB24O43167 697 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-232ENST00000489053 RNF40O75150 1001 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 BEST1O76090 585 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 APODP05090 189 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 ADH5P11766 374 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 RARGP13631 454 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 GALK1P51570 392 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 SEC13P55735 322 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 GAD2Q05329 585 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 BST2Q10589 180 aaKnown RBP9.61□□□□□ -0.87
HDAC6-232ENST00000489053 CCINQ13939 588 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 TMEM196Q5HYL7 178 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 TTI2Q6NXR4 508 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 ASCL5Q7RTU5 278 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 MIB1Q86YT6 1006 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 MLKLQ8NB16 471 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 ANKRD52Q8NB46 1076 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 SLC4A11Q8NBS3 891 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 RNF139Q8WU17 664 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 RUBCNQ92622 972 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 FAM81BQ96LP2 452 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 RNF38Q9H0F5 515 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 TMEM30AQ9NV96 361 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 RWDD2AQ9UIY3 292 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 COQ4Q9Y3A0 265 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 MYO15AQ9UKN7 3530 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 GVINP1Q7Z2Y8 2422 aa9.61□□□□□ -0.87
HDAC6-232ENST00000489053 CHURC1-FNTBB4DL54 471 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 M0QYV0 167 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 OLFM2O95897 454 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 EGFP01133 1207 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 TPM2P07951 284 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 PAEPP09466 180 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 SETSIPP0DME0 302 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 VDRP11473 427 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 USP8P40818 1118 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 PLA2G4AP47712 749 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 FNTBP49356 437 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 TKTL1P51854 596 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 KIF11P52732 1056 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 RAD23BP54727 409 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 KDSRQ06136 332 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 EFEMP1Q12805 493 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 SIM2Q14190 667 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 DHCR24Q15392 516 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 STILQ15468 1287 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 SNX30Q5VWJ9 437 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 ARHGAP17Q68EM7 881 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 FSTL4Q6MZW2 842 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 LONP2Q86WA8 852 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 TTC30AQ86WT1 665 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 MAML2Q8IZL2 1156 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 ZMIZ2Q8NF64 920 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 RPLP0P6Q8NHW5 317 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 RIN3Q8TB24 985 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 WHAMMQ8TF30 809 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 CHFRQ96EP1 664 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 CNOT6LQ96LI5 555 aaKnown RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 XPO6Q96QU8 1125 aaKnown RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 PNKPQ96T60 521 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 DUSP9Q99956 384 aaKnown RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 INTS2Q9H0H0 1204 aaKnown RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 CLSTN2Q9H4D0 955 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 ARHGEF4Q9NR80 690 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 IL37Q9NZH6 218 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 DEC1Q9P2X7 70 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 RASAL2Q9UJF2 1139 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 TSPAN16Q9UKR8 245 aa9.6□□□□□ -0.87
HDAC6-232ENST00000489053 SMG5Q9UPR3 1016 aaKnown RBP9.6□□□□□ -0.87
HDAC6-232ENST00000489053 CFAP54Q96N23 3096 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 FAM92AA1XBS5 289 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 TBC1D3BA6NDS4 549 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 OTOL1A6NHN0 477 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-232ENST00000489053 XPO1O14980 1071 aaKnown RBP9.59□□□□□ -0.87
HDAC6-232ENST00000489053 MED7O43513 233 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 ALDH1A2O94788 518 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 APBB3O95704 486 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 TBX18O95935 607 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 ZBED1O96006 694 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 CYP17A1P05093 508 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 ZDHHC11BP0C7U3 371 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 LCP1P13796 627 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 BMP6P22004 513 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 CNR2P34972 360 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 MFAP3P55082 362 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 YWHAGP61981 247 aaKnown RBP eCLIP9.59□□□□□ -0.87
HDAC6-232ENST00000489053 COG7P83436 770 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 GCNT1Q02742 428 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 FZD5Q13467 585 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 C2orf27AQ580R0 203 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 LY6G5CQ5SRR4 150 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 RRAGAQ7L523 313 aa9.59□□□□□ -0.87
HDAC6-232ENST00000489053 ENOSF1Q7L5Y1 443 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms