RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 KIF2AO00139 706 aaPredicted RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 MYO1FO00160 1098 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 DAB1O75553 588 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 PAPLNO95428 1278 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 LTFP02788 710 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 C8AP07357 584 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 HMGA1P17096 107 aaKnown RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 YWHAQP27348 245 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 HOXA9P31269 272 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 MAN1A1P33908 653 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 FLT3P36888 993 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 NAP1L1P55209 391 aaKnown RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 ETF1P62495 437 aaKnown RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 YWHAZP63104 245 aaKnown RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 OGDHQ02218 1023 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 ZNF252P-AS1Q0IIN9 211 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 TWF1Q12792 350 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 ADGRD2Q7Z7M1 963 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 SLC7A14Q8TBB6 771 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 OVCA2Q8WZ82 227 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 ALS2CR12Q96Q35 445 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 CDCA3Q99618 268 aaPredicted RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 DDX23Q9BUQ8 820 aaKnown RBP16.79■□□□□ 0.28
CLDN11-208ENST00000488989 POPDC2Q9HBU9 364 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 LMCD1Q9NZU5 365 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 IP6K2Q9UHH9 426 aa16.79■□□□□ 0.28
CLDN11-208ENST00000488989 RFXAPO00287 272 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 PALMO75781 387 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 PROSCO94903 275 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 CSPG5O95196 566 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 FYNP06241 537 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 POU2F2P09086 479 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 ZDHHC11BP0C7U3 371 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 SPATA31D3P0C874 917 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 GPD1P21695 349 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 ZNF143P52747 638 aaPredicted RBP16.78■□□□□ 0.28
CLDN11-208ENST00000488989 EPHB3P54753 998 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 MTMR3Q13615 1198 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 KCNC3Q14003 757 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 PIGHQ14442 188 aaPredicted RBP16.78■□□□□ 0.28
CLDN11-208ENST00000488989 VEPH1Q14D04 833 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 ACAP1Q15027 740 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 PRPF38BQ5VTL8 546 aaKnown RBP16.78■□□□□ 0.28
CLDN11-208ENST00000488989 SPATA31D4Q6ZUB0 917 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 HFE2Q6ZVN8 426 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 SCD5Q86SK9 330 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 MON1AQ86VX9 555 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 SYCE1Q8N0S2 351 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 SLC35F6Q8N357 371 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 ARHGAP18Q8N392 663 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 EMC1Q8N766 993 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 STKLD1Q8NE28 680 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 GPR152Q8TDT2 470 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 RXFP2Q8WXD0 754 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 NT5C3BQ969T7 300 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 PSMG2Q969U7 264 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 BTBD6Q96KE9 485 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 TRIM62Q9BVG3 475 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 DPP7Q9UHL4 492 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 NOTCH4Q99466 2003 aa16.78■□□□□ 0.28
CLDN11-208ENST00000488989 GRAP2O75791 330 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 ZMYND10O75800 440 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 EPCAMP16422 314 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 NOS2P35228 1153 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 MATKP42679 507 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 SLC1A1P43005 524 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 PTPN9P43378 593 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 PSEN1P49768 467 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 GNG11P61952 73 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 MESDQ14696 234 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 SNX30Q5VWJ9 437 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 BSPRYQ5W0U4 402 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 BNIPLQ7Z465 357 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 DNAJB7Q7Z6W7 309 aaPredicted RBP16.77■□□□□ 0.28
CLDN11-208ENST00000488989 ITIH5Q86UX2 942 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 DEFB106AQ8N104 65 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 ZNF276Q8N554 614 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 FBXO32Q969P5 355 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 FAM149B1Q96BN6 582 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 C16orf45Q96MC5 204 aaPredicted RBP16.77■□□□□ 0.28
CLDN11-208ENST00000488989 CNPY3Q9BT09 278 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 TLE6Q9H808 572 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 NMUR1Q9HB89 426 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 MAN1C1Q9NR34 630 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 RRN3Q9NYV6 651 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLDN11-208ENST00000488989 HCFC2Q9Y5Z7 792 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 ALG6Q9Y672 507 aa16.77■□□□□ 0.28
CLDN11-208ENST00000488989 PER2O15055 1255 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 LRG1P02750 347 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 HNRNPA1P09651 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLDN11-208ENST00000488989 PDGFRAP16234 1089 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 PSMA2P25787 234 aa16.76■□□□□ 0.27
CLDN11-208ENST00000488989 RNASE9P60153 205 aaKnown RBP16.76■□□□□ 0.27
CLDN11-208ENST00000488989 YWHAGP61981 247 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLDN11-208ENST00000488989 IFRD2Q12894 506 aaPredicted RBP16.76■□□□□ 0.27
CLDN11-208ENST00000488989 TAF10Q12962 218 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms