RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 GBP6Q6ZN66 633 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 ADGRG2Q8IZP9 1017 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 ZNF276Q8N554 614 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 RBBP8NLQ8NC74 664 aaPredicted RBP16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 UBA3Q8TBC4 463 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 ENOX1Q8TC92 643 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 SLC35F5Q8WV83 523 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 CHRDQ9H2X0 955 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 FBRSL1Q9HCM7 1045 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 FAM86C1Q9NVL1 165 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 CFAP97Q9P2B7 532 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 ANAPC1Q9H1A4 1944 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 TRDMT1O14717 391 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 GREM1O60565 184 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 BRD2P25440 801 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 GJA4P35212 333 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 PLA2G4AP47712 749 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 BST2Q10589 180 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 MTAPQ13126 283 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 CCINQ13939 588 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 EXOC3L4Q17RC7 722 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 GAB4Q2WGN9 574 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 VWA3BQ502W6 1294 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 HSP90AA4PQ58FG1 418 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 TMEM196Q5HYL7 178 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 BHLHA9Q7RTU4 235 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 DDX42Q86XP3 938 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 FAM114A1Q8IWE2 563 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 ATOH1Q92858 354 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 ATP2A3Q93084 1043 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 TUBGCP2Q9BSJ2 902 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 KLF16Q9BXK1 252 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 NDST4Q9H3R1 872 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 SIX2Q9NPC8 291 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 CLIC5Q9NZA1 410 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 OBSL1O75147 1896 aa16.79■□□□□ 0.28
CTDSP1-209ENST00000488627 E2F8A0AVK6 867 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 BECN2A8MW95 431 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 SCAMP3O14828 347 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 SETSIPP0DME0 302 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 RARGP13631 454 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 GALK1P51570 392 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 TKTL1P51854 596 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 FSTL4Q6MZW2 842 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 C11orf57Q6ZUT1 292 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 ENOSF1Q7L5Y1 443 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 CPA6Q8N4T0 437 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 NDRG1Q92597 394 aaKnown RBP16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 SPATA6Q9NWH7 488 aaPredicted RBP16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 TMEM63CQ9P1W3 806 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 HESX1Q9UBX0 185 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 NUDT5Q9UKK9 219 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
CTDSP1-209ENST00000488627 KCNJ18B7U540 433 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 ZBED1O96006 694 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 SP9P0CG40 484 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 NBL1P41271 181 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 PSEN1P49768 467 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 MFAP3P55082 362 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 SLC8A3P57103 927 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 KCNMA1Q12791 1236 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 KCNJ12Q14500 433 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 TCP11X2Q5H9J9 407 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 CCDC183Q5T5S1 534 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 CDKAL1Q5VV42 579 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 PMF1Q6P1K2 205 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 RHBDF2Q6PJF5 856 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 ULBP1Q9BZM6 244 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 ACP6Q9NPH0 428 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 ANO10Q9NW15 660 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 AJAP1Q9UKB5 411 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-209ENST00000488627 CACNA1IQ9P0X4 2223 aa16.77■□□□□ 0.27
CTDSP1-209ENST00000488627 TICRRQ7Z2Z1 1910 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 KIF26AQ9ULI4 1882 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 PROB1E7EW31 1015 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 MDM4O15151 490 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 NFATC1O95644 943 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 CYP17A1P05093 508 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 KRT5P13647 590 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 PRKCSHP14314 528 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 RPL34P49207 117 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 AMPD2Q01433 879 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 DHCR24Q15392 516 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 STILQ15468 1287 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 DGKKQ5KSL6 1271 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 SASS6Q6UVJ0 657 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 Q6ZS52 159 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
CTDSP1-209ENST00000488627 SCML4Q8N228 414 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms