RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RASAL3Q86YV0 1011 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 SPARTQ8N0X7 666 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 FAM109AQ8N4B1 249 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 GLIS1Q8NBF1 620 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 B3GALNT2Q8NCR0 500 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 CCDC150Q8NCX0 1101 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 ZBTB9Q96C00 473 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 HAPLN3Q96S86 360 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 OSBPL9Q96SU4 736 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 NELL2Q99435 816 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 GDF15Q99988 308 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.87□□□□□ -1.79
CD46-215ENST00000488596 A0A087WV62 115 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 CCP110O43303 1012 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 VNN1O95497 513 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 HGFP14210 728 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 YY1P25490 414 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 ATICP31939 592 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 GRM1Q13255 1194 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 STARD3Q14849 445 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 MTX3Q5HYI7 312 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 RAP1GAP2Q684P5 730 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 ZNF626Q68DY1 528 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 SFRP4Q6FHJ7 346 aaPredicted RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 KRT28Q7Z3Y7 464 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 MYLK4Q86YV6 388 aaPredicted RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 SLC15A3Q8IY34 581 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 ENAHQ8N8S7 591 aaPredicted RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 SEMA6DQ8NFY4 1073 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 MORC4Q8TE76 937 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 ATG4AQ8WYN0 398 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 MUL1Q969V5 352 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 ZC3H10Q96K80 434 aaKnown RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 MAGEB5Q9BZ81 275 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.86□□□□□ -1.794e-8■■□□□ 14
CD46-215ENST00000488596 DHX36Q9H2U1 1008 aaKnown RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 PPCSQ9HAB8 311 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 HEYLQ9NQ87 328 aaPredicted RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 DKK3Q9UBP4 350 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 SLC39A10Q9ULF5 831 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 ZMYND8Q9ULU4 1186 aaPredicted RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 CAPN11Q9UMQ6 739 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 MAGED2Q9UNF1 606 aaPredicted RBP3.86□□□□□ -1.79
CD46-215ENST00000488596 RIPOR2Q9Y4F9 1068 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 ZNF804BA4D1E1 1349 aa3.86□□□□□ -1.79
CD46-215ENST00000488596 LINC01548A6NM66 108 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 CLCA1A8K7I4 914 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 AGPSO00116 658 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 PODXLO00592 558 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 ADAMTS3O15072 1205 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 INMTO95050 263 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 PRR35P0CG20 571 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 GABRB3P28472 473 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 PPIFP30405 207 aaKnown RBP3.85□□□□□ -1.79
CD46-215ENST00000488596 NTSR1P30989 418 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 ALDH9A1P49189 494 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 TNFAIP2Q03169 654 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 ELF2Q15723 593 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 TBCCQ15814 346 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 TUBB8Q3ZCM7 444 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 TMEM119Q4V9L6 283 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 ARHGAP15Q53QZ3 475 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 MANEALQ5VSG8 457 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 CCDC174Q6PII3 467 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 FBXO38Q6PIJ6 1188 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 KIAA0408Q6ZU52 694 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 ABRAQ8N0Z2 381 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 ZNF527Q8NB42 609 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 SMCR8Q8TEV9 937 aaPredicted RBP3.85□□□□□ -1.79
CD46-215ENST00000488596 ATRIPQ8WXE1 791 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 TMEM41AQ96HV5 264 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 SNX27Q96L92 541 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 C17orf80Q9BSJ5 609 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 TTLL2Q9BWV7 592 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 TRIM5Q9C035 493 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 PCDHAC1Q9H158 963 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 RGL1Q9NZL6 768 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 IGSF9Q9P2J2 1179 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 HPSEQ9Y251 543 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 SNX14Q9Y5W7 946 aa3.85□□□□□ -1.79
CD46-215ENST00000488596 AQP7P3A6NL99 342 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 IFRD1O00458 451 aaPredicted RBP3.84□□□□□ -1.79
CD46-215ENST00000488596 PIP5K1BO14986 540 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 CD3EAPO15446 510 aaKnown RBP3.84□□□□□ -1.79
CD46-215ENST00000488596 FFAR2O15552 330 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 NBNO60934 754 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 HOXB6P17509 224 aaKnown RBP3.84□□□□□ -1.79
CD46-215ENST00000488596 PRKAR1BP31321 381 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 UQCRC1P31930 480 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 LIPAP38571 399 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 PDE6CP51160 858 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 COPAP53621 1224 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 KLF9Q13886 244 aaPredicted RBP3.84□□□□□ -1.79
CD46-215ENST00000488596 CCNIQ14094 377 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 PUM3Q15397 648 aaKnown RBP3.84□□□□□ -1.79
CD46-215ENST00000488596 RAB30Q15771 203 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 GRAMD1BQ3KR37 738 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 TREML2Q5T2D2 321 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 TMTC4Q5T4D3 741 aa3.84□□□□□ -1.79
CD46-215ENST00000488596 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms