RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 HADHQ16836 314 aaKnown RBP13.32□□□□□ -0.28
NELFE-209ENST00000488426 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
NELFE-209ENST00000488426 SPOUT1Q5T280 376 aaKnown RBP13.32□□□□□ -0.28
NELFE-209ENST00000488426 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 OVOS1Q6IE37 1185 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 AADACL2Q6P093 401 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 TMCO3Q6UWJ1 677 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 SLC26A9Q7LBE3 791 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 MAATS1Q7Z4T9 603 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 RBM23Q86U06 439 aaKnown RBP13.32□□□□□ -0.28
NELFE-209ENST00000488426 FAM35AQ86V20 835 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 KLHL7Q8IXQ5 586 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 RCOR2Q8IZ40 523 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 COLGALT1Q8NBJ5 622 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 CCDC26Q8TAB7 109 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 HASPINQ8TF76 798 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 RTP3Q9BQQ7 232 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 RWDD3Q9Y3V2 267 aa13.32□□□□□ -0.28
NELFE-209ENST00000488426 MYBPHLA2RUH7 354 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 NT5C1B-RDH14C9J2C7 533 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 PIK3R2O00459 728 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 CLDN5O00501 218 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 SART1O43290 800 aaKnown RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 PHF2O75151 1096 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 FGF18O76093 207 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 KRT7P08729 469 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 IL9P15248 144 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 PDGFRAP16234 1089 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 TNFRSF8P28908 595 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 PCK1P35558 622 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 OR1G1P47890 313 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 SLC25A11Q02978 314 aaKnown RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 CYP1B1Q16678 543 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 MAP9Q49MG5 647 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 FAM171BQ6P995 826 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 CLEC20AQ6ZU45 233 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 PIGZQ86VD9 579 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 SCUBE3Q8IX30 993 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 RXFP2Q8WXD0 754 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 KHSRPQ92945 711 aaKnown RBP eCLIP13.31□□□□□ -0.28
NELFE-209ENST00000488426 SMARCD1Q96GM5 515 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 PCED1BQ96HM7 432 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 RUNDC3BQ96NL0 473 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 UBXN6Q9BZV1 441 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 ARFGAP3Q9NP61 516 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 KRT82Q9NSB4 513 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 CLDND1Q9NY35 253 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 PER2O15055 1255 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 RAD51CO43502 376 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 KRT1P04264 644 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 CHRNA3P32297 505 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 PTPN7P35236 360 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 TSPY1Q01534 308 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 YWHAHQ04917 246 aaPredicted RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 CTC1Q2NKJ3 1217 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 EFHC1Q5JVL4 640 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 TMEM173Q86WV6 379 aaPredicted RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 CCDC50Q8IVM0 306 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 C12orf50Q8NA57 414 aaPredicted RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 PIWIL1Q96J94 861 aaKnown RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 PKMYT1Q99640 499 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 DDX47Q9H0S4 455 aaKnown RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 NRDE2Q9H7Z3 1164 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 DNAJB4Q9UDY4 337 aa13.31□□□□□ -0.28
NELFE-209ENST00000488426 DMGDHQ9UI17 866 aaKnown RBP13.31□□□□□ -0.28
NELFE-209ENST00000488426 PTPRDP23468 1912 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 TNFRSF10AO00220 468 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 SYN3O14994 580 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 AP1G2O75843 785 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 HEXIM1O94992 359 aaKnown RBP13.3□□□□□ -0.28
NELFE-209ENST00000488426 LCP1P13796 627 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 TCF4P15884 667 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 SDC4P31431 198 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 GJC1P36383 396 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 FLT3P36888 993 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 DHX34Q14147 1143 aaKnown RBP13.3□□□□□ -0.28
NELFE-209ENST00000488426 SMC1AQ14683 1233 aaKnown RBP13.3□□□□□ -0.28
NELFE-209ENST00000488426 SIX1Q15475 284 aaPredicted RBP13.3□□□□□ -0.28
NELFE-209ENST00000488426 ODF2Q5BJF6 829 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 TRNP1Q6NT89 227 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 ADAT2Q7Z6V5 191 aaKnown RBP13.3□□□□□ -0.28
NELFE-209ENST00000488426 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 ARFGAP1Q8N6T3 406 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 PRELID2Q8N945 189 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 HDAC7Q8WUI4 952 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 MYLPFQ96A32 169 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 PABPC5Q96DU9 382 aaKnown RBP13.3□□□□□ -0.28
NELFE-209ENST00000488426 TMEM175Q9BSA9 504 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 COLEC11Q9BWP8 271 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 LMAN2LQ9H0V9 348 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 LRRC4Q9HBW1 653 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 NR2E1Q9Y466 385 aa13.3□□□□□ -0.28
NELFE-209ENST00000488426 F8W810 466 aa13.29□□□□□ -0.28
NELFE-209ENST00000488426 TBX10O75333 385 aa13.29□□□□□ -0.28
NELFE-209ENST00000488426 TADA2AO75478 443 aa13.29□□□□□ -0.28
NELFE-209ENST00000488426 FBXO21O94952 628 aa13.29□□□□□ -0.28
NELFE-209ENST00000488426 OAZ2O95190 189 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms