RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 OSER1Q9NX31 292 aa24.94■■□□□ 1.58
RHBDD3-205ENST00000488106 APEX2Q9UBZ4 518 aa24.94■■□□□ 1.58
RHBDD3-205ENST00000488106 MYO15AQ9UKN7 3530 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 H0Y858 1186 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 M0QYV0 167 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 XPO1O14980 1071 aaKnown RBP24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 IRF1P10914 325 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 MFAP3P55082 362 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 MLLT6P55198 1093 aaPredicted RBP24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 TCP11X2Q5H9J9 407 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 CAVIN1Q6NZI2 390 aaKnown RBP24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 CCDC186Q7Z3E2 898 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 CPA6Q8N4T0 437 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 ATP2A3Q93084 1043 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 ZSWIM1Q9BR11 485 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 TAB2Q9NYJ8 693 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 NAGPAQ9UK23 515 aa24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.93■■□□□ 1.58
RHBDD3-205ENST00000488106 NCAM2O15394 837 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 EEF1GP26641 437 aaKnown RBP24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 TKTL1P51854 596 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 NHLH1Q02575 133 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 PON2Q15165 354 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 EML3Q32P44 896 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 RAB41Q5JT25 222 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 LCLAT1Q6UWP7 414 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 DDX42Q86XP3 938 aaKnown RBP eCLIP24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 FAM122AQ96E09 287 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 ZFRQ96KR1 1074 aaKnown RBP24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 NUDT5Q9UKK9 219 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 USP3Q9Y6I4 520 aa24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 MYO18AQ92614 2054 aaKnown RBP24.92■■□□□ 1.58
RHBDD3-205ENST00000488106 TBX18O95935 607 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 SETSIPP0DME0 302 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 RARGP13631 454 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 USP8P40818 1118 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 ADIGQ0VDE8 80 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 ANGPT1Q15389 498 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 C1orf228Q6PIY5 440 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 ENOSF1Q7L5Y1 443 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 SCD5Q86SK9 330 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 ZNF687Q8N1G0 1237 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 SECISBP2LQ93073 1101 aaKnown RBP24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 UBXN6Q9BZV1 441 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 LINC00597Q9H2U6 94 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 ECT2Q9H8V3 914 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 LRRC4Q9HBW1 653 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 SIX2Q9NPC8 291 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 CYLDQ9NQC7 956 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 FAM86C1Q9NVL1 165 aa24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 SPATA6Q9NWH7 488 aaPredicted RBP24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 AJAP1Q9UKB5 411 aaPredicted RBP24.91■■□□□ 1.58
RHBDD3-205ENST00000488106 MDM4O15151 490 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 PLA2G5P39877 138 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 PLA2G4AP47712 749 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 RGS7P49802 495 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 TYRO3Q06418 890 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 FZD5Q13467 585 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 STILQ15468 1287 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 PKDCCQ504Y2 493 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 C10orf120Q5SQS8 335 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 CDKAL1Q5VV42 579 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 CLDN23Q96B33 292 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 FAM81BQ96LP2 452 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 ULBP1Q9BZM6 244 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 CNTN6Q9UQ52 1028 aa24.9■■□□□ 1.58
RHBDD3-205ENST00000488106 ATP5C1P36542 298 aaKnown RBP24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 MAGEA9P43362 315 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 PSEN1P49768 467 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 MYL5Q02045 173 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 CNGA2Q16280 664 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 SIX6OS1Q8N1H7 587 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 NDRG1Q92597 394 aaKnown RBP24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 CHFRQ96EP1 664 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 LMAN1LQ9HAT1 526 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 ACP6Q9NPH0 428 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 RBM12Q9NTZ6 932 aaKnown RBP24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 FANCLQ9NW38 375 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 SH3BP1Q9Y3L3 701 aa24.89■■□□□ 1.58
RHBDD3-205ENST00000488106 PIK3R2O00459 728 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 LETM1O95202 739 aaPredicted RBP24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 NFATC1O95644 943 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 ZBED1O96006 694 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 RALAP11233 206 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 GNA15P30679 374 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 GJA4P35212 333 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 RPS9P46781 194 aaKnown RBP24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 KRT31Q15323 416 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 ATOH1Q92858 354 aaPredicted RBP24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 WBP2Q969T9 261 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 VPS16Q9H269 839 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 DNAJC12Q9UKB3 198 aa24.88■■□□□ 1.57
RHBDD3-205ENST00000488106 BECN2A8MW95 431 aa24.87■■□□□ 1.57
RHBDD3-205ENST00000488106 SLC9A3R1O14745 358 aaPredicted RBP24.87■■□□□ 1.57
RHBDD3-205ENST00000488106 THAP12O43422 761 aa24.87■■□□□ 1.57
RHBDD3-205ENST00000488106 CHRNB1P11230 501 aa24.87■■□□□ 1.57
RHBDD3-205ENST00000488106 LCP1P13796 627 aa24.87■■□□□ 1.57
RHBDD3-205ENST00000488106 YWHAGP61981 247 aaKnown RBP eCLIP24.87■■□□□ 1.57
RHBDD3-205ENST00000488106 LRRC32Q14392 662 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms